Protein Alignment Dsp1 and hmg-20

DIOPT Version :9

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_493178.1
• Gene: hmg-20 / 173124
• WormBaseID: WBGene00012209
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 265
• Identity: 53/265 - (20%)
• Similarity: 105/265 - (39%)
• Gaps: 45/265 - (16%)

  Fly   127 DANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMSRVK-ADAKPRGRMTAY 190
            |:.|....:.......::.:.......:.:.:...::.||....::|..|.| |...|...::.
 Worm     7 DSTTGPAAKSLPTSDVEEDEAAPDLKAESEDVTSSEEMQNKNPVSAPEKRAKTASFSPPPALSP- 70

  Fly   191 AYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPP 255
            |:.:|...||.:.|...::                  |:|:|:..::.||     .|:|.....|
 Worm    71 AHSIQMENEEIEVKMEVDS------------------DEEEKKLPKITEK-----RAKMVYKKKP 112

  Fly   256 KGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDER-NKVKALNPEFGVGDIAKELGRKWSDVDPE 319
            :     :.|:.....|||||||:.|.:..|....| :..||:..:   .:|...|...|..:..|
 Worm   113 E-----KEKEAVPFIDPNAPKRNRSGYVHFIIHRRASYSKAVMSQ---REINISLAADWQKLTAE 169

  Fly   320 VKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQ-QQHQQLEEQ 383
            .:..::..|:.:|.:|...|.|||.:          .:..:.|.::|..|::.:. .::.:...|
 Worm   170 ERIPFQQRADEEKVKYLELMEEYKKT----------DSHKEFQKKRAKFLSSQSNGSKNAKKRRQ 224

  Fly   384 HDDDD 388
            .|.||
 Worm   225 ADSDD 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	13/69 (19%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	15/64 (23%)
hmg-20	NP_493178.1	HMG	126..193	CDD:197700	18/69 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.840