Protein Alignment Dsp1 and LOC108352140

DIOPT Version :10

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: XP_017453216.1
• Gene: LOC108352140 / 108352140
• RGDID: 11427469
• Length: 168
• Species: Rattus norvegicus
• Alignment Length: 161
• Identity: 56/161 - (34%)
• Similarity: 94/161 - (58%)
• Gaps: 8/161 - (4%)

  Fly   182 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYE 246
            :|:..::.|.:|:...|.:.:::.|:....|.||||||:|:|||:..||||::..:|::||.||:
  Rat     8 RPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQ 72

  Fly   247 AEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGR 311
            .||:||..|:     |.::|   :|.:||::..|:|..|..|..:::|..:|.:.||.:||..||
  Rat    73 REMRNYSGPR-----RERRR---RDADAPRKPPSSFLLFSQDHFDEIKEQHPNWTVGQVAKAAGR 129

  Fly   312 KWSDVDPEVKQKYESMAERDKARYEREMTEY 342
            .|:......|..||..|...:|:|..|...|
  Rat   130 MWARCSEADKIPYEERAAVLRAKYLEEREAY 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box_HMGB_rpt1	182..250	CDD:438794	26/67 (39%)
		HMG-box_NHP6-like	262..342	CDD:438792	25/79 (32%)
LOC108352140	XP_017453216.1	HMG-box_SF	8..76	CDD:469606	26/67 (39%)
		HMG-box_HMGB_rpt2	95..161	CDD:438795	21/66 (32%)