Protein Alignment Dsp1 and HMG20A

DIOPT Version :10

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_060670.1
• Gene: HMG20A / 10363
• HGNCID: 5001
• Length: 347
• Species: Homo sapiens
• Alignment Length: 147
• Identity: 51/147 - (34%)
• Similarity: 80/147 - (54%)
• Gaps: 10/147 - (6%)

  Fly   238 AEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQ-IKDPNAPKRSLSAFFWFCNDERNKVKALNPEFG 301
            ||.::||:|.|.::    |.....:|:|||: ::|.||||..|:.:..|.|:.|.:::|..||..
Human    69 AEGNEQRHEDEQRS----KRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVP 129

  Fly   302 VGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEY-KTSGKIAMSAPSMQASMQAQAQK 365
            ..:|.:.||.:||.:.||.||:|...|:|||.||.:|:.:| ||......|    :.:...|..|
Human   130 FPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFS----RKTQDRQKGK 190

  Fly   366 AALLAAAAQQQHQQLEE 382
            :....||.|..|...:|
Human   191 SHRQDAARQATHDHEKE 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box_HMGB_rpt1	182..250	CDD:438794	6/11 (55%)
		HMG-box_NHP6-like	262..342	CDD:438792	33/80 (41%)
HMG20A	NP_060670.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..113		17/47 (36%)
		DUF5401	<59..313	CDD:375164	51/147 (35%)
		HMG-box_HMG20A	83..186	CDD:438833	38/106 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	179..211		8/33 (24%)