DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CATSPER2 and cch1

DIOPT Version :9

Sequence 1:NP_001269239.1 Gene:CATSPER2 / 117155 HGNCID:18810 Length:534 Species:Homo sapiens
Sequence 2:NP_593894.1 Gene:cch1 / 2542812 PomBaseID:SPAC6F6.01 Length:1854 Species:Schizosaccharomyces pombe


Alignment Length:347 Identity:74/347 - (21%)
Similarity:143/347 - (41%) Gaps:68/347 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   163 FIL--EILLK---WLSNFSVFWKSAWNVFDFVVTMLSLLPEVVVLVGVTGQSV---WLQLLRICR 219
            |:|  |::|:   :|.::.:|::...|:.|.|:.:|:|   |.:|..:....|   ||.:..|.|
pombe   557 FLLAAEVILRFFAYLPDYRLFFRRYTNLVDIVLAVLNL---VTLLPSIRKNPVAFGWLSIFAIAR 618

Human   220 VLRSLKLLAQFRQIQIIILVLVRALKSMTFLLMLLLIFFYIFAVTGVYVFSEYTRSPRQDLEYHV 284
            :.|.:.|:...|:   |..:|....|.:..|::.|:|..:|.::..|.:|.:.......| :..:
pombe   619 IYRCILLIPYTRK---IAKLLFSNFKQLLNLMLFLVIVLFIASLCAVRLFQDLPNDGDSD-DDAI 679

Human   285 FFSDLPNSLVTVFILFTLDHW----------YALLQDVWKVPEVSRIFSSIYFILWLLLGSIIFR 339
            .|:....|.:.::.:.|.::|          .|.|...| :|       ..:|.||.|..:.:..
pombe   680 SFATTYESFLYMYQILTSENWTDVMFAIQARLAHLHLSW-IP-------GAFFTLWFLFSNNVVL 736

Human   340 SIIVAMMVTNFQNIRKELNEEMARREVQLKADMFKRQIIQRRKNMSHEALTSSHSKIEDRGASQQ 404
            |:.:|::..||           |..|..||.:..|..:.:..:|.:....:.:.:.:..|..|::
pombe   737 SMFIAVIQVNF-----------APSESDLKMEQLKMYLARLLRNYNPFQASLTLNALIKRNGSRK 790

Human   405 RESLDLSEVSEVESNYGATEEDLITSASKTEETLSKKREYQSSSCVSSTSSSYSSS--------- 460
            .:::|       ||:|....||.|.........:..|...:.|...|...|.||.:         
pombe   791 GKTVD-------ESHYEWLYEDNIIKGFLRVTNIPPKEPLKPSLDTSPELSKYSLAKLSNNFKRF 848

Human   461 -------SESRFSESIGRLDWE 475
                   |::.|...|| :.||
pombe   849 VMRDDPFSQAYFKRVIG-IRWE 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CATSPER2NP_001269239.1 Ion_trans 178..356 CDD:278921 42/190 (22%)
cch1NP_593894.1 Ion_trans 201..485 CDD:278921
Ion_trans 533..748 CDD:278921 47/216 (22%)
Ion_trans 968..1220 CDD:278921
Ion_trans 1289..1517 CDD:278921
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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