| Sequence 1: | XP_016861165.1 | Gene: | MED12L / 116931 | HGNCID: | 16050 | Length: | 2197 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_509645.1 | Gene: | dpy-22 / 181194 | WormBaseID: | WBGene00001081 | Length: | 3498 | Species: | Caenorhabditis elegans |
| Alignment Length: | 2661 | Identity: | 506/2661 - (19%) |
|---|---|---|---|
| Similarity: | 899/2661 - (33%) | Gaps: | 834/2661 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Human 7 LSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIVINP---SK 68
Human 69 IGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDLAGNKPLSILAKKV 133
Human 134 PILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYYSAISEAKIKKRQAPDPNLEWTQISTRYLREQ 198
Human 199 LAKISDFYHMASS--------------TGDGPVPV--PPEVEQAMKQWEYNEKLAFHMFQEGMLE 247
Human 248 KHEYLTWILDVLEKIRPMDDD---LLKLLLPLMLQ---------------------YSDEFVQSA 288
Human 289 YLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLAFSDFLS 353
Human 354 CAQHGPLVYGLSCMLQTVTLCCPSALVWN-YSTNENKSANP------GSPLDLLQVAPSSLPMPG 411
Human 412 GNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFDRTDS 476
Human 477 SNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLLEKRQAEIEA 541
Human 542 ERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDPNSECEKVEFVNLVLLFCEF 606
Human 607 IRHDVFSHDAYMCTLISRGDLSVTA--------------STRPRSPVGENADE----HYSKDHDV 653
Human 654 KMEEQSIMAHMGIDSGTTNIFDEVDKSDFKTDFGSEFPIFSPMPGESCENANTSLGRRMSVNCEK 718
Human 719 LVKREKPRELIFPSNYDLLRHLQYATHFPIPLDESSSHECNQRTILLYGVGKERD----EARHQL 779
Human 780 KKITKDILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTKLQLLSYFDQHQVTSQISNNV 844
Human 845 LEQITSFASGTSYHLPLAHHIQLIFDLMEPALNINGLIDFAIQLLNE-LSVVEAELL-LKSSSLA 907
Human 908 GSYTTGLCVCIVAVLRRYHSCLILNPDQTAQVFEGLCGVVKH----VVNPSECSSPERCILAYLY 968
Human 969 DLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMMDFIENPSARSI------- 1026
Human 1027 -------------------NYSMLGKILSDNAAN------------RYSFVCNTLMNVCMGHQDA 1060
Human 1061 GRINDIANFSSELTACCTVLSSEWLGVLKALC-CSSNHVWGFNDVLCTVDVSDLSFHDSLATFIA 1124
Human 1125 ILIARQCF----SLEDVVQHVALPSLL------------------AAACGD----ADAEPGARMT 1163
Human 1164 CRLLLHLFRAPQACFLPQATGKPF------PGI-------RSSCDRHLLAAAHNSIEVGAVFAVL 1215
Human 1216 KAIMMLGDAKIGNNSVSSL---KNDDFTMRGLRCDGNADDIWTASQNPKSCGKSISIETANLR-E 1276
Human 1277 Y----ARYVLRTICQQEWVGEHCL-----KEPERLCTDKELILDPVLSNMQAQKLLQLICYPHGI 1332
Human 1333 KECTEGDNL----------QRQHIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGS-----GSVA 1382
Human 1383 EMNNLLDNIAKATIEVFQQSADLNNSSNSGMSLFNPNSIGSADTSSTRQNGIKTF--LSSSERRG 1445
Human 1446 VWLVAPLIARLPT--------------SVQGRVLKAAGEELEKGQHLGSSSKKERDRQKQKSMSL 1496
Human 1497 LSQQPFLSLVLTCLKGQDEQR------EGLLTSLQNQV---NQILSNWREERYQDDIKARQMMHE 1552
Human 1553 ALQLRLNLVGGMFDTVQRSTQWTTDWALLLLQIITSGTVDMHTNNELFTTVLDMLGVLINGTLA- 1616
Human 1617 SDLSNASP--GGSEENKRAYMNLVKKLKKELGDK-RSESIDKVRQLLPLPKQTCDVITCEPMGS- 1677
Human 1678 -LIDTKGNK--IAGFDSIDKKQGLQVSTKQKVSPWDLFEGQKNPAPL----SWAW--FGTVRVDR 1733
Human 1734 RVIKYEEQHHLLLYHTHPMPKPRSYYL-----------------------QPLPLPPEEE----E 1771
Human 1772 EEPTSPVSQEPERKSAELSDQGKTTTDEEKKTK-------------GRKRKTKSSSRVDEY---- 1819
Human 1820 ----------------PQSN--IYRVPPNYSPISSQMMHHPQSTLWGYNLVGQPQQPGFFLQNQS 1866
Human 1867 LTPGG-------SRLDPAGSFVPTNTKQA-LSNMLQRRSG-----AMM--QPPSLHAITSQQQLI 1916
Human 1917 QMKLLQQQQQQRLLRQAQTRPFQQDFCNSAVSLLEDFDNIMGQPGDQAALFAAQARPS-PQLPQY 1980
Human 1981 PGL------QQAQTMPQGYTMYGTQMPLQQT--SQQQAGSVVLSPSYNS---------RAYPAAH 2028
Human 2029 ------------SNPVLMERLRQIQQQP------------------------------------- 2044
Human 2045 --SGYV-QQQASPYLQPLTGSQRLNHQALQQSPLVGGGIDAVLTSAHPNLPSVP----------- 2095
Human 2096 --------------------LPQDPMR--------------------------------PRQPQV 2108
Human 2109 RQQQ--------------RLLQMQQPQQPQP----------QQPPQPQQSSQSQSQTLGLQAMQP 2149
Human 2150 ---QQPLFPRQGLQQTQQ---QQQTAALVRQLQKQLSSNQ--PQQ------GVTPYGHPSH 2196 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| MED12L | XP_016861165.1 | Med12 | 106..161 | CDD:462818 | 4/54 (7%) |
| Med12-LCEWAV | 283..765 | CDD:463472 | 91/506 (18%) | ||
| Med12-PQL | 1837..2071 | CDD:463471 | 54/318 (17%) | ||
| dpy-22 | NP_509645.1 | Med12 | 97..158 | CDD:462818 | |
| MDN1 | <502..>781 | CDD:444083 | 55/339 (16%) | ||
| Med12-LCEWAV | 815..>990 | CDD:463472 | 45/185 (24%) | ||
| DUF4670 | <2516..2741 | CDD:464815 | 24/224 (11%) | ||
| MAP7 | 2624..2730 | CDD:461709 | 10/105 (10%) | ||
| Glutenin_hmw | <2687..3166 | CDD:367362 | 36/139 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||