Sequence 1: | NP_446316.1 | Gene: | Vcp / 116643 | RGDID: | 621595 | Length: | 806 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097249.1 | Gene: | TER94 / 36040 | FlyBaseID: | FBgn0286784 | Length: | 826 | Species: | Drosophila melanogaster |
Alignment Length: | 800 | Identity: | 665/800 - (83%) |
---|---|---|---|
Similarity: | 736/800 - (92%) | Gaps: | 6/800 - (0%) |
- Green bases have known domain annotations that are detailed below.
Rat 8 KGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVL 72
Rat 73 SDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Rat 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Rat 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFF 267
Rat 268 LINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332
Rat 333 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLE 397
Rat 398 QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 462
Rat 463 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Rat 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 592
Rat 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAIL 657
Rat 658 KANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNP-SAME 721
Rat 722 VEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQ 785
Rat 786 GSGGGTGGNVYTEDNDDDLY 805 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vcp | NP_446316.1 | CDC48 | 25..764 | CDD:273521 | 631/739 (85%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 708..727 | 11/19 (58%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 768..806 | 16/38 (42%) | |||
Interaction with UBXN6. /evidence=ECO:0000250 | 797..806 | 4/8 (50%) | |||
PIM motif. /evidence=ECO:0000250|UniProtKB:P55072 | 802..806 | 3/3 (100%) | |||
TER94 | NP_001097249.1 | CDC48 | 47..787 | CDD:273521 | 631/739 (85%) |
CDC48_N | 47..129 | CDD:280513 | 66/81 (81%) | ||
CDC48_2 | 153..213 | CDD:215011 | 44/59 (75%) | ||
AAA | 263..392 | CDD:278434 | 118/128 (92%) | ||
AAA | 536..669 | CDD:278434 | 125/132 (95%) | ||
Vps4_C | <741..783 | CDD:286426 | 34/41 (83%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353889 | |
Domainoid | 1 | 1.000 | 263 | 1.000 | Domainoid score | I1871 |
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5168 | |
Inparanoid | 1 | 1.050 | 1347 | 1.000 | Inparanoid score | I129 |
OMA | 1 | 1.010 | - | - | QHG60945 | |
OrthoDB | 1 | 1.010 | - | - | D169540at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000137 | |
OrthoInspector | 1 | 1.000 | - | - | oto97941 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100525 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23077 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1760 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |