| Sequence 1: | XP_008761976.1 | Gene: | Tnc / 116640 | RGDID: | 621057 | Length: | 2202 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_723894.2 | Gene: | CG31832 / 318970 | FlyBaseID: | FBgn0051832 | Length: | 227 | Species: | Drosophila melanogaster |
| Alignment Length: | 221 | Identity: | 77/221 - (34%) |
|---|---|---|---|
| Similarity: | 115/221 - (52%) | Gaps: | 25/221 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 1982 PRDCSQAMLNGDTTSGLYTIYINGDK----TQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWK 2042
Rat 2043 AYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGESA--YAVYDRFSVGDAKSRYKL-KV 2104
Rat 2105 EGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRY---GDNNHSQ 2166
Rat 2167 GVNWFHWKGHEYSIQFAEMKLRPSNF 2192 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Tnc | XP_008761976.1 | EGF_2 | 346..372 | CDD:285248 | |
| EGF_2 | 377..403 | CDD:285248 | |||
| EGF_2 | 408..434 | CDD:285248 | |||
| EGF_2 | 434..465 | CDD:285248 | |||
| EGF_2 | 468..496 | CDD:285248 | |||
| EGF_2 | 504..527 | CDD:285248 | |||
| EGF_2 | 533..558 | CDD:285248 | |||
| EGF_2 | 592..620 | CDD:285248 | |||
| FN3 | 624..710 | CDD:238020 | |||
| fn3 | 713..793 | CDD:278470 | |||
| FN3 | 804..891 | CDD:238020 | |||
| fn3 | 894..976 | CDD:278470 | |||
| fn3 | 986..1064 | CDD:278470 | |||
| fn3 | 1075..1154 | CDD:278470 | |||
| fn3 | 1166..1241 | CDD:278470 | |||
| fn3 | 1257..1336 | CDD:278470 | |||
| fn3 | 1348..1417 | CDD:278470 | |||
| fn3 | 1444..1509 | CDD:278470 | |||
| fn3 | 1534..1606 | CDD:278470 | |||
| fn3 | 1622..1702 | CDD:278470 | |||
| FN3 | 1712..1798 | CDD:238020 | |||
| fn3 | 1801..1874 | CDD:278470 | |||
| fn3 | 1889..1961 | CDD:278470 | |||
| Fibrinogen_C | 1981..2190 | CDD:278572 | 75/217 (35%) | ||
| CG31832 | NP_723894.2 | FReD | 28..225 | CDD:238040 | 73/211 (35%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||