DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB39B and Rab2

DIOPT Version :10

Sequence 1:NP_741995.1 Gene:RAB39B / 116442 HGNCID:16499 Length:213 Species:Homo sapiens
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:188 Identity:91/188 - (48%)
Similarity:133/188 - (70%) Gaps:2/188 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     5 WLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQE 69
            :.|.|:.|:|||:.||||||:.:||:.||..|.|.|:||:|.:|::.|: ||:||||||||||||
  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWDTAGQE 66

Human    70 RFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVT 134
            .||||||:|||.:.|.||::|||.|.:|.::..|||:.:.|... .:|.:|:|:|.|||::|:|.
  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNS-NMVIMLIGNKSDLDSRREVK 130

Human   135 RHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKSG 192
            :.|.|..|..:|:.::|||||.|.|||:||.:..::|||.::.|...|.....|:|.|
  Fly   131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB39BNP_741995.1 Rab39 7..213 CDD:133311 91/186 (49%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 35..43 3/7 (43%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 12/15 (80%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 91/188 (48%)

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