DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB39B and Rab10

DIOPT Version :10

Sequence 1:NP_741995.1 Gene:RAB39B / 116442 HGNCID:16499 Length:213 Species:Homo sapiens
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:165 Identity:72/165 - (43%)
Similarity:115/165 - (69%) Gaps:2/165 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRS 73
            |:|::||||.|||:|::.||::..|......|:|:||..:.||:. ||:||||||||||||||.:
  Fly    10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELR-GKKIKLQIWDTAGQERFHT 73

Human    74 ITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEA 138
            ||.:|||.::|.:|::||||.:||:|:.:||.....|... .:..:::|:|||:..:|.|.:...
  Fly    74 ITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANE-DVEKMILGNKCDMTDKRVVNKERG 137

Human   139 EKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYE 173
            |.:|..:|::::||||:..||:|:||.:|...|.:
  Fly   138 EAIAREHGIRFMETSAKSNINIERAFCELAEAILD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB39BNP_741995.1 Rab39 7..213 CDD:133311 72/165 (44%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 35..43 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 10/15 (67%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 72/165 (44%)

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