DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB39B and Rab9Fb

DIOPT Version :10

Sequence 1:NP_741995.1 Gene:RAB39B / 116442 HGNCID:16499 Length:213 Species:Homo sapiens
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:210 Identity:78/210 - (37%)
Similarity:115/210 - (54%) Gaps:7/210 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERF 71
            |.|:::|:||..||||||:.||::.||.:....|||:||..|.||: .|:.:.||||||||.|||
  Fly     6 YLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVEL-AGRMVMLQIWDTAGDERF 69

Human    72 RSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRH 136
            :|:..:|||.:.|.||::|||:.:||:|:..||:|.: .:....:..:|||:|||....|||...
  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIR-RMSSESVNVMLVGNKCDDLDNRQVRME 133

Human   137 EAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIY-ELVKRGEITIQEGWEGVKSGFVP----N 196
            :....|....:.:.|.||:...||...|..|:..|| .||......:..|.|...:...|    |
  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198

Human   197 VVHSSEEVVKSERRC 211
            :.....:..|....|
  Fly   199 LAGKDRQRAKDSNTC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB39BNP_741995.1 Rab39 7..213 CDD:133311 78/210 (37%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 35..43 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 8/15 (53%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 66/158 (42%)

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