DRSC/TRiP Functional Genomics Resources

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Protein Alignment LYSMD3 and CG15471

DIOPT Version :10

Sequence 1:NP_938014.1 Gene:LYSMD3 / 116068 HGNCID:26969 Length:306 Species:Homo sapiens
Sequence 2:NP_572187.2 Gene:CG15471 / 31412 FlyBaseID:FBgn0029726 Length:128 Species:Drosophila melanogaster


Alignment Length:72 Identity:19/72 - (26%)
Similarity:30/72 - (41%) Gaps:12/72 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    73 DTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETLCPPKGRQTSRHSSVQY 137
            ||:..:||:|..::..|.|.|.:.|.....|.|.:.:|:.  :|..:..|..|..          
  Fly    32 DTMTRLALKYDTSIGRICRANRMHSQDVLQARRHVWVPIP--NSQFQMGCQEKSE---------- 84

Human   138 SSEQQEI 144
            |.|..||
  Fly    85 SDESPEI 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LYSMD3NP_938014.1 LysM <69..112 CDD:440998 12/38 (32%)
CG15471NP_572187.2 LysM 26..69 CDD:396179 11/36 (31%)

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