Sequence 1: | XP_006538554.1 | Gene: | Agrn / 11603 | MGIID: | 87961 | Length: | 2057 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 2441 | Identity: | 485/2441 - (19%) |
---|---|---|---|
Similarity: | 736/2441 - (30%) | Gaps: | 904/2441 - (37%) |
- Green bases have known domain annotations that are detailed below.
Mouse 88 LDGGNKVVIGGFGDPLICDNQVSTGDTRIF-----FVNPAPP-----YLWPAHKNEL-------- 134
Mouse 135 MLNSSLMRITLRNLEEVEFCVEDKPGIHFTAAPSMPPDVCRGML--------------------- 178
Mouse 179 ------CGFGAVCEPSVEDPGRASCVCKKNVCPAMV-----APVCGSD-ASTYSNECELQRAQCN 231
Mouse 232 QQRRIRLLRQGPCGSR----DPCANVTCSFGSTCVPSADGQTASCLCPTTCFG------AP---- 282
Mouse 283 -------DGTVCGSDGV-DYPSECQLLRHACANQEHIFKKFDG-PCDPCQGSMSDLNHICRVNPR 338
Mouse 339 TRHPEMLLRPENC----PAQHTPICGD-DGVTYENDCVMSRIGAARGLLLQKVRSGQCQTRDQC- 397
Mouse 398 ----------PETCQFNSVCLSRRGRPHCSCDRVTCDGAYR-----------PVCAQDGH--TYD 439
Mouse 440 NDCWRQQAE--------------CRQQQTIPPKHQGPCD-----QTPSPCRGAQCAFGATCTVK- 484
Mouse 485 NGKAV--------CECQRVCSGGYD-------------------------PVCGSD--------- 507
Mouse 508 ----GVTYGS---VCELESMACTLGREIRVARRGPCDRCGQCRFGSLCEVETGRCVCPSECVESA 565
Mouse 566 QPVCGSDGHT------------------YASECELHVHACTHQISLYVASAGHCQTCGETVCTFG 612
Mouse 613 AVCSAGQCVCPRCEHPPPGPVC-------------GS-------------DGVTYLSACELREAA 651
Mouse 652 CQQQVQIEEARAGP-CEPAECGSGGSGSGED--NACEQELCRQHGGVWDEDSEDGPCVCDFSCQS 713
Mouse 714 VLKSPVCGSDGVTYSTECHLKKARCEARQELYVAAQGACRGPTLAPLLPMASPHCAQTPYGCCQD 778
Mouse 779 NVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGH 843
Mouse 844 SGCTPCSCDPRGAVRD--DCEQMTGLCSCRPGVAGPKCGQCPDGQALGHLGCEADPTTPVTCVEM 906
Mouse 907 HCEFGASCVEEAGFAQCVCPTL-----TCPEANSTKVCGSDGVTYGNECQLKTIACRQRLDISIQ 966
Mouse 967 SLGPCRESVAPGVSPTSASMTTPRHILSRTLAS---------PHSSLPLSPSTTAHDWPTPLPTS 1022
Mouse 1023 PQTVVGTPRSTAATPSDVASLATAIFRESGSTN------------GSGD---------EELSGDE 1066
Mouse 1067 EAS-------------------GGGSGGLEP-------------PVGSVVVTHGPPIERASCYNS 1099
Mouse 1100 PLGCCSD-----------GKTPSLDSEGSNCPATKAFQGVLELEGVEGQELFYTPEMADPKSELF 1153
Mouse 1154 -GE-TARSIESTLDDL------------------------FRNSDVKKDFWSIRLRELGPGKLVR 1192
Mouse 1193 A--IVDVHFDPT----------TAF----QAPDVGQALLQQIQVSRPWALAVRRPLREHVRFLDF 1241
Mouse 1242 DWFPTFFTGAATGTTAAVATAR-----------------ATTVSRLSA-SSVTPR---------- 1278
Mouse 1279 VYPSYTSRPVGRTTAPLTTRRPPTTTAS--------IDRPRTPGPQRPPKSCDSQPCLHGGTCQD 1335
Mouse 1336 LD-SGKGFS--------CSCTAGRAGTVCEKV----------------QLPSVPA---------- 1365
Mouse 1366 -------FKGHSFLAFPT-----LRAYHTLRLALEFRALETEGLLLYNGN-----ARGKDFLALA 1413
Mouse 1414 LLDGHVQFRFDTGSGPAVLTSLVPVEPGRWHRLELSRHWRQGTLSVDGEAP---VVGESPSG-TD 1474
Mouse 1475 G----LNLD--TKLYVGGLPEEQVATVLDRTSVGI------------GLKGCIRMLDINNQQLEL 1521
Mouse 1522 SDWQRAVVQSSGVGECGDHPCSPNPCHGGALCQALEAGVFLCQCPPGRFGPTCADEKNPCQPNPC 1586
Mouse 1587 HGSAPCHVLSRGGAKCACPLGRSGSFCETVLENAGSRPFLADFNGFSYLELKGLHTFERDLGEKM 1651
Mouse 1652 ALEMVFLA--RGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAI-IRSKEPIALGTW 1713
Mouse 1714 VRVFLERNGRKGALQVGD-------GPRVLG-ESPKSRKVPHTMLNLKEPLYVGGAPDFSKLARG 1770
Mouse 1771 AAVASGFDGAIQLVSLRGHQLLTQEHVLRAVDVAPFAGHPCTQAVDNPCLNGGSCIPREATYECL 1835
Mouse 1836 CPGGFSGLHCEKGIVEKSVGDLETLAFDGRTYIEYLNAVTESELTNEIPAPETLDSRALFSEKAL 1900
Mouse 1901 QSNHFELSLRTEATQGLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTNRWL 1965
Mouse 1966 RVRAHREHREGSLQ-----VGNEAPVTGSSPLGATQ--LDTDGALWLGGL---QKLPVGQALPKA 2020
Mouse 2021 YGTGFVGCLRDVVVGHRQLHLLEDAVTK-PELRPCP 2055 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Agrn | XP_006538554.1 | NtA | 46..148 | CDD:367356 | 16/77 (21%) |
KAZAL | 198..244 | CDD:197624 | 14/51 (27%) | ||
KAZAL | 274..319 | CDD:197624 | 13/63 (21%) | ||
Kazal_1 | 351..391 | CDD:333798 | 7/44 (16%) | ||
KAZAL_FS | 423..463 | CDD:238052 | 11/66 (17%) | ||
KAZAL | 491..536 | CDD:197624 | 11/85 (13%) | ||
KAZAL | 556..601 | CDD:197624 | 9/62 (15%) | ||
KAZAL | 621..666 | CDD:197624 | 13/71 (18%) | ||
KAZAL | 706..752 | CDD:197624 | 7/45 (16%) | ||
EGF_Lam | 795..835 | CDD:238012 | 18/39 (46%) | ||
Laminin_EGF | 849..>885 | CDD:365839 | 14/37 (38%) | ||
KAZAL | 924..971 | CDD:197624 | 9/51 (18%) | ||
SEA | 1121..1245 | CDD:214554 | 30/165 (18%) | ||
EGF | 1322..1352 | CDD:333761 | 7/38 (18%) | ||
Laminin_G_1 | 1389..1520 | CDD:333802 | 46/157 (29%) | ||
Laminin_G_1 | 1657..1792 | CDD:333802 | 36/145 (25%) | ||
EGF_CA | 1814..1846 | CDD:238011 | 8/31 (26%) | ||
Laminin_G_1 | 1910..2040 | CDD:333802 | 35/139 (25%) | ||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | |
EGF_Lam | 272..>314 | CDD:238012 | |||
EGF_Lam | 332..389 | CDD:238012 | |||
EGF_Lam | 402..443 | CDD:238012 | |||
EGF_Lam | 448..491 | CDD:238012 | |||
Laminin_EGF | 495..543 | CDD:278482 | |||
Laminin_EGF | 541..589 | CDD:278482 | |||
Laminin_EGF | 587..634 | CDD:278482 | |||
EGF_Lam | 631..673 | CDD:238012 | |||
Laminin_EGF | 677..729 | CDD:278482 | |||
Laminin_EGF | 732..782 | CDD:278482 | |||
EGF_Lam | 785..828 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
Laminin_EGF | 1375..1423 | CDD:278482 | 13/47 (28%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 10/40 (25%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 15/69 (22%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 12/65 (18%) | ||
LamB | 1632..1760 | CDD:214597 | 18/127 (14%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 7/35 (20%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 13/68 (19%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 12/49 (24%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 16/105 (15%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 22/53 (42%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 15/44 (34%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 7/34 (21%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 54/273 (20%) | ||
Tar | 2278..2662 | CDD:223910 | 65/413 (16%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 21/147 (14%) | ||
LamG | 2674..2843 | CDD:238058 | 53/182 (29%) | ||
LamG | 2878..3029 | CDD:238058 | 45/210 (21%) | ||
LamG | 3078..3205 | CDD:214598 | 37/142 (26%) | ||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |