DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WDFY2 and Stam

DIOPT Version :10

Sequence 1:NP_443182.1 Gene:WDFY2 / 115825 HGNCID:20482 Length:400 Species:Homo sapiens
Sequence 2:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster


Alignment Length:183 Identity:36/183 - (19%)
Similarity:66/183 - (36%) Gaps:60/183 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    19 RMEG----------SQEVVNMAVIVPKEEGVISVSED-----RTVRVWLKRDSG----------- 57
            |.||          |:.|...|..:||:..|:|..::     :.:.:.||.:.|           
  Fly   138 RQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKTGSVASTG 202

Human    58 --QYWPSVY-------HAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKMTPVKNYQAH 113
              ..:||:|       .:.||..:..:..||.|::.      .:.:|..:|: |::|        
  Fly   203 TASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVR------ALYDFEAAEE-NELT-------- 252

Human   114 QSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASGLQFDVE 166
                   .|..|:..||   .|....|....:.:..|.:.::.|.:.|..|.|
  Fly   253 -------FFAGEIIHVL---DDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPE 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDFY2NP_443182.1 WD40 <16..272 CDD:441893 36/183 (20%)
WD 1 22..61 11/66 (17%)
WD40 repeat 27..64 CDD:293791 10/54 (19%)
WD 2 66..105 8/38 (21%)
WD40 repeat 72..132 CDD:293791 11/59 (19%)
WD 3 112..150 6/37 (16%)
WD 4 153..192 4/14 (29%)
WD40 repeat 159..197 CDD:293791 3/8 (38%)
WD 5 197..236
WD40 repeat 203..240 CDD:293791
WD 6 240..279
WD40 repeat 245..283 CDD:293791
FYVE_WDFY1_like 279..348 CDD:277258
WD40 repeat 321..363 CDD:293791
WD 7 364..399
WD40 repeat 369..395 CDD:293791
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 1/2 (50%)
SH3_STAM 235..288 CDD:212754 13/77 (17%)
GAT_STAM 337..413 CDD:410593
PHA03247 <436..526 CDD:223021
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.