DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adrb1 and Octbeta1R

DIOPT Version :9

Sequence 1:NP_031445.2 Gene:Adrb1 / 11554 MGIID:87937 Length:466 Species:Mus musculus
Sequence 2:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:494 Identity:158/494 - (31%)
Similarity:239/494 - (48%) Gaps:85/494 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 GASEPCNLSSAAPLPDGAATAARLL----------------------------VLASPPASLLPP 45
            |.:||  |:|..|:.:.:|:.||.|                            |:|.....:  .
  Fly    29 GTNEP--LASKIPVLEESASHARYLKFIADGLIDEGLGSAVGSGSSIAVSVEDVVAGQAQDI--Q 89

Mouse    46 ASEGSAPLSQQWTAGMGL------LLALIVLLIVVGNVLVIVAIAKTPRLQTLTNLFIMSLASAD 104
            |||||.. ....::.:.|      ::..|:|..::||:||||::.:..:|:.:||.|::|||.||
  Fly    90 ASEGSTD-DADGSSHLALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVAD 153

Mouse   105 LVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSL 169
            :::.|..:.|.|::::.|:|.:||..|::|.|.||...||||..||.|::|||.||..|..|..:
  Fly   154 MLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLI 218

Mouse   170 LTRARARALVCTVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFY 234
            :|:.|...::..||...||:|||||...|: ..::..:...::|..|:|..|:||||.||.:||:
  Fly   219 MTQRRVFIMLLMVWLSPALLSFLPICSGWY-TTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFW 282

Mouse   235 VPLCIMAFVYLRVFREAQKQVKKIDSCERRFLGGPARPPSPEPSPSPGPPRPADSLANGRSSKRR 299
            :|..:|..:|.|:::||.:|.:.:   .|..:.........:.|..| .|||:..:.....|..|
  Fly   283 IPGIVMLSMYYRIYQEADRQERLV---YRSKVAALLLEKHLQISQIP-KPRPSIQVEQSTISTMR 343

Mouse   300 PSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRDLVPDRLFV-FFNWLGYANSAFNP 363
                   ||:||.:||||||..|.:|||||||..:|.:.....:..||.| ...|:||.|||.||
  Fly   344 -------RERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNP 401

Mouse   364 IIYCR-SPDFRKAFQRLLCCARRAA---CRRRAAHGDRPRASGCLARAGPPPSPGAPSDDDDDDA 424
            |||.. :.|||.||::.|......|   |||     .|.|                   |||.|.
  Fly   402 IIYAYFNRDFRAAFKKTLKSLFPYAFYFCRR-----GRGR-------------------DDDRDL 442

Mouse   425 GTTPPARLLEPWTGCNGGTTTVDSDSSLDEPGRQGFSSE 463
            ....|:|     .|.||...|....:.:........|||
  Fly   443 EFGGPSR-----RGTNGAQRTGSGSAEMANCVNSTASSE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adrb1NP_031445.2 7tmA_Beta1_AR 59..376 CDD:320624 119/324 (37%)
TM helix 1 60..86 CDD:320624 9/31 (29%)
TM helix 2 93..120 CDD:320624 11/26 (42%)
TM helix 3 131..161 CDD:320624 16/29 (55%)
TM helix 4 175..193 CDD:320624 6/17 (35%)
TM helix 5 221..253 CDD:320624 15/31 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..302 7/37 (19%)
TM helix 6 306..336 CDD:320624 18/29 (62%)
TM helix 7 345..370 CDD:320624 14/26 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..466 14/66 (21%)
PDZ-Binding. /evidence=ECO:0000250 463..466 1/1 (100%)
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 45/118 (38%)
7tm_1 124..404 CDD:278431 111/291 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2479
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5266
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328277at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8780
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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