DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adra2c and Oamb

DIOPT Version :9

Sequence 1:NP_031444.2 Gene:Adra2c / 11553 MGIID:87936 Length:458 Species:Mus musculus
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:594 Identity:159/594 - (26%)
Similarity:234/594 - (39%) Gaps:201/594 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    39 WVPPPGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL 103
            |..|....|       .||:.|:.|..:.||.||:.||..|..||:..|.|:|:||.||:||...
  Fly    15 WTEPANLIS-------LAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72

Mouse   104 VMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRV 168
            |:|||...|:...|.||.:||.::||:||..||:||::|||||||||.:||:.|.|....:.::.
  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKA 137

Mouse   169 KATIVAVWLISAVISFPPLVS-------------------FYRRP-------------------- 194
            |:.|..:|::|..|.|||||.                   :|...                    
  Fly   138 KSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEA 202

Mouse   195 ----------DGAAY-------------------------------------------------- 199
                      :|.||                                                  
  Fly   203 SLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDL 267

Mouse   200 --------PQ---------CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSE- 246
                    ||         |.|.::..|:|.|.:|||:.|..:|...|.||||.|...||.::: 
  Fly   268 LNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQG 332

Mouse   247 ---KRGPAG---------------------------PDGASPTTENGLGKAAGEN---------G 272
               .:|..|                           .:|::.:|...||..:.|.         .
  Fly   333 FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLH 397

Mouse   273 HCAPPRTEVE-PDESSAA----------ERRRRRGAL----RRGGRRREGAEGDT-------GSA 315
            |....:..|. |...:.:          |||:...||    ..|...||..|...       |.|
  Fly   398 HHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVA 462

Mouse   316 DG----PGPGLAAEQGARTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQAREKRF 376
            ..    .|.|| .|...|.::.|...|...||.:::.:     .||..::.|.|.::    |.:.
  Fly   463 SSCYLQVGKGL-PELARRQSNTSEAGGSGHSRPANKKM-----GRRNIKAQVKRFRM----ETKA 517

Mouse   377 TFVLAVVMGVFVLCWFPFFFSYSLYGICREACQLPEPLFKFFFWIGYCNSSLNPVIYTVFNQDFR 441
            ...||:::|:|:.||.|||..|.:...|:: |..| .||...||:|||||::||:||.:|::|||
  Fly   518 AKTLAIIVGMFIFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFR 580

Mouse   442 RSFKHILFR 450
            .:||.|:.|
  Fly   581 FAFKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adra2cNP_031444.2 7tmA_alpha2C_AR 60..444 CDD:320446 150/565 (27%)
TM helix 2 86..112 CDD:320446 13/25 (52%)
TM helix 3 124..154 CDD:320446 18/29 (62%)
TM helix 4 166..189 CDD:320446 9/22 (41%)
TM helix 5 207..236 CDD:320446 12/28 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..343 28/163 (17%)
TM helix 6 371..401 CDD:320446 11/29 (38%)
TM helix 7 412..437 CDD:320446 13/24 (54%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 60/143 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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