DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adra1b and Oamb

DIOPT Version :9

Sequence 1:NP_001271309.1 Gene:Adra1b / 11548 MGIID:104774 Length:515 Species:Mus musculus
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:759 Identity:198/759 - (26%)
Similarity:261/759 - (34%) Gaps:345/759 - (45%)


- Green bases have known domain annotations that are detailed below.


Mouse    20 LKDANFTGPNQTSSNSTLPQLDVTRAISVGLVLGAFILFAIVGNILVILSVACNRHLRTPTNYFI 84
            :|...:|.|      :.|..|.|...|:| ||:|        ||.|||.:|.|:..||:.||:||
  Fly    10 IKSVKWTEP------ANLISLAVLEFINV-LVIG--------GNCLVIAAVFCSNKLRSVTNFFI 59

Mouse    85 VNLAIADLLLSFTVLPFSATLEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCAISIDRYIGVRY 149
            ||||:||||:...|||||||.||...|:.|.::|.||.||||..||||||:|||||:|||:.|..
  Fly    60 VNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTR 124

Mouse   150 SLQYPTLVTRRKAILALLSVWVLSTVISIGPLLGWKEP--------------------------- 187
            .:.||::::.:||...:..:||||..|...||:|||:.                           
  Fly   125 PVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDG 189

Mouse   188 -----------------------------------APNDDK------------------------ 193
                                               ||.|..                        
  Fly   190 QLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTAS 254

Mouse   194 -------------------------------ECGVTEEPFYALFSSLGSFYIPLAVILVMYCRVY 227
                                           :|.:|.:..|.|:|:|||||||:.|:|..|.|:|
  Fly   255 SSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIY 319

Mouse   228 IVAKRTTKNLEAGVMKEMSNSK---------ELTLRIH--------------------------- 256
            ..|.|||:.:..| .|....||         .||||||                           
  Fly   320 RAAVRTTRAINQG-FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTP 383

Mouse   257 ---------------------------SKNFHE---------------DTLSSTKAKGHNPRSSI 279
                                       |:|..|               :.|.:....|.|.|.|.
  Fly   384 SPERLSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGREST 448

Mouse   280 AVKLF--------------------------------------------------------KFSR 288
            ..:|:                                                        :|..
  Fly   449 ESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRM 513

Mouse   289 EKKAAKTLGIVVGMFILCWLPFFIALPLGSLFSTLKPPDAVFKVVFWLGYFNSCLNPIIYPCSSK 353
            |.||||||.|:|||||.||.|||....:.........| .:|.|:|||||.||.:||:||...||
  Fly   514 ETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSK 577

Mouse   354 EFKRAFMRILGCQC-------------RGG-----RRRRRRRRL--GGCAYTY------------ 386
            :|:.||.||: |:|             ||.     |.|.|...:  ...|:::            
  Fly   578 DFRFAFKRII-CRCFCSRQSVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMS 641

Mouse   387 -RPWTRG-GSLERSQS-----RKDSL-------------------------DDSGSCMSGSQRTL 419
             .|. |. |....|||     ||.||                         |.|.||        
  Fly   642 NDPRXRSFGPSSSSQSSLGGLRKTSLKVPVYEICHPLVMETACYSYVEATSDGSASC-------- 698

Mouse   420 PSASPSPGYLGRGTQ-PPVELCAFPEWKPGALLSLPEPPGRRGR 462
            ..|..:.|.:.:.||  |.||.|....:.|.   :|.|.|:|.|
  Fly   699 SVAGGNGGSVPKRTQLXPRELMALRGTRTGV---IPLPAGQRPR 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adra1bNP_001271309.1 7tmA_alpha1B_AR 46..359 CDD:320449 152/563 (27%)
TM helix 1 47..73 CDD:320449 10/25 (40%)
TM helix 2 80..106 CDD:320449 19/25 (76%)
TM helix 3 118..148 CDD:320449 21/29 (72%)
TM helix 4 160..183 CDD:320449 9/22 (41%)
TM helix 5 200..229 CDD:320449 15/28 (54%)
TM helix 6 287..317 CDD:320449 18/29 (62%)
TM helix 7 327..352 CDD:320449 13/24 (54%)
Nuclear localization signal. /evidence=ECO:0000250 368..378 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..430 14/68 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..515
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 68/133 (51%)
7tm_1 37..>181 CDD:278431 68/143 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 291 1.000 Inparanoid score I2771
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1095345at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.970

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