DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP4 and gbp7

DIOPT Version :9

Sequence 1:NP_443173.2 Gene:GBP4 / 115361 HGNCID:20480 Length:640 Species:Homo sapiens
Sequence 2:XP_002942120.3 Gene:gbp7 / 100496810 XenbaseID:XB-GENE-5947524 Length:648 Species:Xenopus tropicalis


Alignment Length:608 Identity:264/608 - (43%)
Similarity:406/608 - (66%) Gaps:5/608 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    18 SESIMMAPICLVENQEE-QLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLMNRLAGKRNGFP 81
            ||..|.||:||:||..: :|:||.:|.|||.||:|||||||||||||||||||||:||||..||.
 Frog     3 SEVKMEAPMCLIENSPDGKLSVNPQAKEILSKITQPVVVVAIVGLYRTGKSYLMNKLAGKNAGFD 67

Human    82 LGSTVQSETKGIWMWCVPHLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYNSV 146
            ||:|:.::|||||||||||.:|.|||||||||||||||:|.:.|||:|||.|||||||:.||||.
 Frog    68 LGATIVAQTKGIWMWCVPHPTKKNHTLVLLDTEGLGDVQKGDKKNDTWIFCLAVLLSSAMVYNSK 132

Human   147 STINHQALEQLHYVTELAELIRAKSCPRPDEAEDSSEFASFFPDFIWTVRDFTLELKLDGNPITE 211
            .||:..::|:||||.||.|.|:.|:....||   .:||:..||.||||||||||.|:::|..||:
 Frog   133 GTIDQDSIEKLHYVQELTEKIKVKASENDDE---EAEFSKHFPIFIWTVRDFTLSLEVNGEKITD 194

Human   212 DEYLENALKL-IPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRPTNDKQYLNHMDEVPEENLERH 275
            |:|||:||.: .|.:..:.|..|:|::|||.:|.:||||.|..||::......:::|.:|.|...
 Frog   195 DDYLEHALAVKEPERTLRDQMLNLPKKCIRMYFPRRKCFTFCSPTSNLNLFQKLEQVSDEQLFPS 259

Human   276 FLMQSDNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYVDAINSGAVPCLENAVTALAQLENPA 340
            |:.::..||.|||::|:.|.|.......|...|.|...|.:|||:|.|||:||||..|::.||.|
 Frog   260 FVAKAKQFCDYIFSYAEVKHLDGFQPAKGNMFGNLAEKYTEAINNGQVPCMENAVLYLSENENKA 324

Human   341 AVQRAADHYSQQMAQQLRLPTDTLQELLDVHAACEREAIAVFMEHSFKDENHEFQKKLVDTIEKK 405
            ||::|:::|..:|.:::..||:|:.:.:|::..||.:|:.:||..||||::|.|||:|:..|:||
 Frog   325 AVEKASEYYETEMDKRVVFPTETMDQFMDINKECEEKAVDIFMARSFKDKDHHFQKELMGRIQKK 389

Human   406 KGDFVLQNEEASAKYCQAELKRLSEHLTESILRGIFSVPGGHNLYLEEKKQVEWDYKLVPRKGVK 470
            |.:|:.:||:||...|...|.:|||.|.:::..|.:.||||:.|:.:|..::...|....:||:|
 Frog   390 KNEFLKKNEDASVANCDDLLAKLSEDLDKALTAGSYVVPGGYQLFKQEMDKIVGKYNEDTKKGIK 454

Human   471 ANEVLQNFLQSQVVVEESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQMMEAQE 535
            .:||||.||:::....::||.|||||...|:...||:|..|:...||::.:.|..:::|.::.|.
 Frog   455 GDEVLQKFLKNKEATGDTILTSDKALDKNERIKEAEKAKAESLMIEQKVSQVKASQEEQKVDNQM 519

Human   536 RSFQEYMAQMEKKLEEERENLLREHERLLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIEST 600
            :||:....::.:||:.|:..:..:.|||:..|.:.:|.:.::...::::....:|:.|:::.|..
 Frog   520 KSFEMNFQRLLEKLQAEKMMMREQIERLVSEKRREEELLTRQGCARQAKLYAAQISDLEKEKEQA 584

Human   601 KNEQLRLLKILDMASNIMIVTLP 623
            ..|......:.:...::::...|
 Frog   585 DQETAWYTPVWESLKSVVVDVAP 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP4NP_443173.2 GTPase domain (Globular). /evidence=ECO:0000250 1..325 167/308 (54%)
GBP 33..296 CDD:280433 148/264 (56%)
GBP_C 298..594 CDD:202427 102/295 (35%)
GBP_C 304..594 CDD:293879 102/289 (35%)
coiled coil 563..574 CDD:293879 3/10 (30%)
coiled coil 583..594 CDD:293879 1/10 (10%)
gbp7XP_002942120.3 P-loop_NTPase 19..280 CDD:422963 148/263 (56%)
GBP_C 282..578 CDD:397124 102/295 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H137329
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 1 1.000 - - otm54712
Panther 1 1.100 - - O PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.110

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