DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP4 and LOC100488013

DIOPT Version :10

Sequence 1:NP_443173.2 Gene:GBP4 / 115361 HGNCID:20480 Length:640 Species:Homo sapiens
Sequence 2:XP_012823014.1 Gene:LOC100488013 / 100488013 XenbaseID:XB-GENE-29079035 Length:657 Species:Xenopus tropicalis


Alignment Length:632 Identity:315/632 - (49%)
Similarity:430/632 - (68%) Gaps:30/632 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    22 MMAPICLVENQE-EQLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLMNRLAGKRN---GFPL 82
            |..|:||:||:| |:||||.:|||||.:|:||||||||||.||||||||||.|||.||   ||.|
 Frog    34 MGEPMCLIENKEGEELTVNQEALEILLEITQPVVVVAIVGKYRTGKSYLMNILAGARNEHSGFAL 98

Human    83 GSTVQSETKGIWMWCVPHLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYNSVS 147
            ||||:|:|||||||||||.:|..||||||||||||||||.:.|||:|||:||:||||:.||||:.
 Frog    99 GSTVRSKTKGIWMWCVPHPTKKGHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTLVYNSMG 163

Human   148 TINHQALEQLHYVTELAELIRAKSCP-RPDEAEDSSEFASFFPDFIWTVRDFTLELKLDGNPITE 211
            ||:.||::.|||||||.|.|:.||.. :.::.:::.||..|||.|||.||||||:|:.||.||||
 Frog   164 TIDQQAMDNLHYVTELTERIKVKSHEGKAEDMDETGEFKRFFPSFIWCVRDFTLQLEKDGVPITE 228

Human   212 DEYLENALKLIPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRPTNDKQYLNHMDEVPEENLERHF 276
            |:||.:||:|..|...|:|:.|:||:||||:|...||||||||.: |..|..::|:.|..||..|
 Frog   229 DQYLMDALELKRGVGKKVQDYNLPRQCIRHYFHSHKCFVFDRPAS-KADLQRLEELQESELELEF 292

Human   277 LMQSDNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYVDAINSGAVPCLENAVTALAQLENPAA 341
            :.::..|||:|..|...|||..|.||||:.||.|...|.:||.||::||:||||.|||..||..|
 Frog   293 VDKAITFCSFINQHCNAKTLVGGTIVTGRTLGNLTDLYTEAIRSGSIPCMENAVKALADRENSRA 357

Human   342 VQRAADHYSQQMAQQL-RLPTDTLQELLDVHAACEREAIAVFMEHSFKDENHEFQKKLVDTIEKK 405
            ||.|...|.::|::|: :.||:|.:|.|.:|..||:||..|||..||||||.::|.:|:|.:.::
 Frog   358 VQEALTKYEEEMSKQIAKFPTETQEEFLSIHQECEKEATKVFMGLSFKDENGQYQNQLIDELAEE 422

Human   406 KGDFVLQNEEASAKYCQAELKRLSEHLTESILRGIFSVPGGHNLYLEEKKQVEWDYKLVPRKGVK 470
            |..:.|.|||.|||.|:|.|::|:|.|...|..|.||.|||:..::.||..:...|.....||||
 Frog   423 KSKYSLHNEEESAKKCKAILQKLNESLEREISEGKFSKPGGYTQFISEKNLLVDKYNKTKGKGVK 487

Human   471 ANEVLQNFLQSQVVVEESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQMMEAQE 535
            |.|:::.||..:.:|||||||:|::|||.||.|..:||..|.||:|::::.|..:..::.||.|:
 Frog   488 APEIIEEFLNEKKIVEESILQADQSLTATEKEIEEQRARTETAEREKQIVEENNRRLEKDMENQK 552

Human   536 RSFQEYMAQMEKKLEEERENLLREHERLLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKIEST 600
            :|.:::...:|:|:||||:.|:.::|.::|.|||..:|:||:.|..:||.:              
 Frog   553 KSLEDHKKMLEEKMEEERKKLMEQNEWMIKEKLKEADELLKKGFDAQSEIV-------------- 603

Human   601 KNEQLRLLKILDMAS-----NIMIVTL---PGASKLLGVGTKYLGSR 639
             ..|.||||.|:.|:     |:.|:.|   .|...|.|.|...|..|
 Frog   604 -KYQSRLLKELNTAAAAQPLNVNILGLGRGRGRGWLRGRGRGLLRGR 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP4NP_443173.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..325 184/307 (60%)
GBP 33..296 CDD:460516 163/267 (61%)
GBP_C 298..594 CDD:460721 128/296 (43%)
LOC100488013XP_012823014.1 GBP 47..312 CDD:460516 162/265 (61%)
GBP_C 314..601 CDD:460721 126/286 (44%)

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