DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBP4 and gbp5

DIOPT Version :10

Sequence 1:NP_443173.2 Gene:GBP4 / 115361 HGNCID:20480 Length:640 Species:Homo sapiens
Sequence 2:NP_001120244.2 Gene:gbp5 / 100145295 XenbaseID:XB-GENE-5756296 Length:636 Species:Xenopus tropicalis


Alignment Length:625 Identity:320/625 - (51%)
Similarity:435/625 - (69%) Gaps:26/625 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    22 MMAPICLVENQE-EQLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLMNRLAGKRNGFPLGST 85
            |..|:||:.|:| |.|.||.:||:||.||:||||||||||.||||||||||:|||.||||.||||
 Frog     6 MEEPMCLIGNKEGEDLIVNQEALQILLKITQPVVVVAIVGKYRTGKSYLMNKLAGARNGFALGST 70

Human    86 VQSETKGIWMWCVPHLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSSSFVYNSVSTIN 150
            |||:|||||||||||.:|..:|||||||||||||||.:.|||:|||:||:||||:.||||:.||:
 Frog    71 VQSKTKGIWMWCVPHPTKQGNTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTLVYNSMGTID 135

Human   151 HQALEQLHYVTELAELIRAKSCPRPDEA-------EDSSEFASFFPDFIWTVRDFTLELKLDGNP 208
            .||::.|||||||.|||:.||    |||       ::|.||..|||.|||.||||||:|:.:|:|
 Frog   136 QQAMDNLHYVTELTELIKVKS----DEAQATEEEDDESGEFKRFFPSFIWCVRDFTLKLEKNGSP 196

Human   209 ITEDEYLENALKLIPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRPTNDKQYLNHMDEVPEENLE 273
            ||||:||.:||:|..|...|:|:.|:||:||||:|...||||||||.:... |..::|:.|..||
 Frog   197 ITEDQYLLDALELKKGVGKKVQDYNLPRQCIRHYFHSHKCFVFDRPASTLA-LQRLEELQESELE 260

Human   274 RHFLMQSDNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYVDAINSGAVPCLENAVTALAQLEN 338
            ..|:.::..|||.|:..:..|||..|..|||:.||.|.|:|.:||.||::||:||||.||||:||
 Frog   261 SKFVEKAAEFCSCIYGKSNAKTLVGGYTVTGRLLGNLAVSYTEAIRSGSIPCMENAVIALAQIEN 325

Human   339 PAAVQRAADHYSQQMAQQL-RLPTDTLQELLDVHAACEREAIAVFMEHSFKDENHEFQKKLVDTI 402
            ..|||.|...|.::|::|: :.||:|.:|.|.:|..||:||..|||..||||||.|:||:|:|.:
 Frog   326 SRAVQEALTKYEEEMSKQIAKFPTETQEEFLSIHQECEKEATQVFMGLSFKDENLEYQKQLIDEL 390

Human   403 EKKKGDFVLQNEEASAKYCQAELKRLSEHLTESILRGIFSVPGGHNLYLEEKKQVEWDYKLVPRK 467
            .:||..:.|.|||.|||.|:|.|::|||:|...||.|.||.|||:..::.||..:..:|.....|
 Frog   391 AEKKSKYSLYNEEESAKKCKAILQKLSENLEREILNGKFSKPGGYTQFISEKNLLVDEYNRTKGK 455

Human   468 GVKANEVLQNFLQSQVVVEESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQMME 532
            ||||.|:||.||..:..||.:|||:|::||..||.||.:||..|.||:|::::.|..:..::.:|
 Frog   456 GVKALEILQEFLNEKENVEAAILQADQSLTHKEKEIAEQRARTETAEREKQIVEENNRRLEKDIE 520

Human   533 AQERSFQEYMAQMEKKLEEERENLLREHERLLKHKLKVQEEMLKEEFQKKSEQLNKEINQLKEKI 597
            ||::|.:|:...||:|:||||:.|:.::|.::|.|||.|||||.:.|.|:||.|..:|..:|.|.
 Frog   521 AQKKSLEEHKKMMEEKMEEERKKLMEQNEWMIKEKLKEQEEMLTKGFHKESEMLKNQIEDIKRKN 585

Human   598 ESTKNEQLRLLKILDMASNIMIVTLPGASKLLGVGTKYLG 637
            .:.....|       :...:.::.||     :|:..:.||
 Frog   586 SAAAERSL-------LGDILSVIFLP-----IGLAARELG 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP4NP_443173.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..325 184/310 (59%)
GBP 33..296 CDD:460516 164/270 (61%)
GBP_C 298..594 CDD:460721 141/296 (48%)
gbp5NP_001120244.2 GBP 19..283 CDD:460516 163/268 (61%)
GBP_C 285..582 CDD:460721 141/296 (48%)

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