Sequence 1: | NP_001287758.1 | Gene: | CIRBP / 1153 | HGNCID: | 1982 | Length: | 297 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001035411.2 | Gene: | cirbpb / 678563 | ZFINID: | ZDB-GENE-030131-5841 | Length: | 206 | Species: | Danio rerio |
Alignment Length: | 209 | Identity: | 122/209 - (58%) |
---|---|---|---|
Similarity: | 136/209 - (65%) | Gaps: | 45/209 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Human 68 NGKSVDGRQIRVDQAGKSSDNRSRGYRGGS-AGGRGFFRGGRGRG-------------RGF---- 114
Human 115 ------SRGGGDRGYGGNR----------------FESRSGGYGGSRDYYSSRSQSGGYSDRSSG 157
Human 158 GSYRDSYDSYGKSH 171 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CIRBP | NP_001287758.1 | RRM | <3..>90 | CDD:223796 | 65/86 (76%) |
RRM_CIRBP_RBM3 | 6..85 | CDD:240895 | 60/78 (77%) | ||
cirbpb | NP_001035411.2 | RRM | <2..>81 | CDD:223796 | 61/78 (78%) |
RRM_SF | 5..83 | CDD:302621 | 59/77 (77%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 112 | 1.000 | Domainoid score | I23809 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 197 | 1.000 | Inparanoid score | I11056 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG43500 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000446 | |
OrthoInspector | 1 | 1.000 | - | - | otm28540 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100265 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR48034 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X860 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 1 | 1.500 | - | - | ||
12 | 12.470 |