DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CIRBP and CG34334

DIOPT Version :10

Sequence 1:NP_001287758.1 Gene:CIRBP / 1153 HGNCID:1982 Length:297 Species:Homo sapiens
Sequence 2:NP_001097042.1 Gene:CG34334 / 5740122 FlyBaseID:FBgn0263829 Length:708 Species:Drosophila melanogaster


Alignment Length:246 Identity:47/246 - (19%)
Similarity:73/246 - (29%) Gaps:89/246 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   263 LVVDQTKSSNVWSLGVTIWELFELGAQPY----------PQHSDGQVLAYAVREQQLKLPKPQLQ 317
            ||::.|||.  |.:..||:.|......||          |::|   :|:..|..      .....
  Fly    31 LVLNSTKSE--WLVNKTIYSLEFYSDDPYFYFNYTVSICPENS---ILSTRVTS------NGTFY 84

Human   318 LALSDRWYEVMQFCWLQPEQRPTAEE-------VHLLLS---YLCAK--GTTELEEEFERRWRSL 370
            :.|..|::. ...|||..:.:....|       .|..||   |...:  ..::..||:..:..:.
  Fly    85 VCLEVRFFS-DGICWLYEDAQKLCSENNGMGLTGHFQLSEFDYFSKRMINNSKYNEEYLPKSMNG 148

Human   371 RPGGSTGLGSGSAAPAAATAASAELTAASSFPLLERFTSDGFHVDSDDVLTVTETSHGLNFEYKW 435
            .|..:..||                           ...||..:|.         |:..|||::.
  Fly   149 MPETTWQLG---------------------------IFIDGRSLDE---------SNPKNFEFED 177

Human   436 EAGCGAEEYPPSGA----------------ASSPGSAARLQELCAPDSSPP 470
            :...|...|...|.                |..|.:   |...|..|..||
  Fly   178 KTHEGIRNYQFFGGTLNQITVPIYILIVTYADIPST---LDARCTSDDFPP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CIRBPNP_001287758.1 RRM_CIRBP_RBM3 6..85 CDD:409883
CG34334NP_001097042.1 Herpes_BLLF1 <312..504 CDD:282904
RRM_RNPS1 537..610 CDD:409800
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.