Protein Alignment CIRBP and ssx

DIOPT Version :9

• Sequence 1: NP_001287758.1
• Gene: CIRBP / 1153
• HGNCID: 1982
• Length: 297
• Species: Homo sapiens
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 105
• Identity: 33/105 - (31%)
• Similarity: 58/105 - (55%)
• Gaps: 8/105 - (7%)

Human     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
            |:|..||.:.|:..|:::||.||.|.:..:::|:.|.|.||..||.:...::|::|:.|:|....
  Fly   181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVP 245

Human    73 DGRQ----IRV-DQAGKSSDNRSRGYRGGSAGGRGFFRGG 107
            :|..    :|: ::.||:...:.....||..||.|   ||
  Fly   246 EGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGG---GG 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CIRBP	NP_001287758.1	RRM	<3..>90	CDD:223796	26/86 (30%)
		RRM_CIRBP_RBM3	6..85	CDD:240895	25/81 (31%)
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621
		RRM_SF	179..257	CDD:302621	24/75 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910