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Protein Alignment CIRBP and rsp-6
DIOPT Version :9
Sequence 1: | NP_001287758.1 |
Gene: | CIRBP / 1153 |
HGNCID: | 1982 |
Length: | 297 |
Species: | Homo sapiens |
Sequence 2: | NP_741446.1 |
Gene: | rsp-6 / 177566 |
WormBaseID: | WBGene00004703 |
Length: | 179 |
Species: | Caenorhabditis elegans |
Alignment Length: | 175 |
Identity: | 63/175 - (36%) |
Similarity: | 93/175 - (53%) |
Gaps: | 18/175 - (10%) |
- Green bases have known domain annotations that are detailed below.
Human 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
:.|::||||..|...|.||::|.::|:|.:|.|.: |..||.||.::::.||:||:.|::|
Worm 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAVRALDG 61
Human 70 KSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF-------FRGGRGRGRGFSRGGGDRGYGGNR 127
..:.|.:.||:.: :...|..|.|||..||||. :||.|||.|..|| |||...:|
Worm 62 SRICGVRARVELS--TGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRSRSRSR---DRGRDRSR 121
Human 128 FESRSGGYGGSRDYYSSRSQSGGYSDRSSGGSYRDSYDSYGKSHS 172
..||......|||....||:....: ||...|.::...|:.||.|
Worm 122 DRSRDRSRDRSRDRSRERSRERERT-RSRSRSPQERDRSHSKSRS 165
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0.928771 |
Normalized mean entropy |
S1239 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.860 |
|
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