DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and SmydA-2

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster


Alignment Length:594 Identity:120/594 - (20%)
Similarity:208/594 - (35%) Gaps:184/594 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   296 CHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGF 360
            |..|  ...|:..|..|....|||:|..::.|:..||:||....:.....:..|:.....:.:|.
  Fly     9 CALC--QAKASQLCAACRNVVYCSREHQKEHWKKGHRSECQCFEIATNEVLGRHLRATRDIKIGE 71

Human   361 EDVRKIITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNI-----VETPIPG--CD--ING 416
            :.:::....|..|:::..:||....|.       |...:..||.     ...|:.|  |:  ::.
  Fly    72 QILKEAPLVLGPKVASAPLCLGCHRNL-------LAPGKPRGNYHKCSSCSWPLCGKECEDSVHH 129

Human   417 KYE------NNYNAVFNLLPHTENHSPEHKFLCALCVSALCR----------------------- 452
            |.|      :|:.:..|.:|..|.....     |.||..|.|                       
  Fly   130 KAECQLMSGSNFQSKINYVPGEEERKES-----AYCVIMLLRCMHLKDKDPDAFLKLYNLEDHLK 189

Human   453 -QLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKG 516
             :||....|.:....|   :.:|..:..:..|::.|..:|.:     |..|     |.:...|: 
  Fly   190 ERLETPLYQVLRANLI---TFIKTVLGMKDWPEMDILRIAAI-----LDTN-----TFEVRQPR- 240

Human   517 SIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATI-RASQRIRKGQEILHCY-GPHKSR 579
                :.|::|   .::|..::::|.|.||....|...:..: .|.::|.||:.:...| .|.:|.
  Fly   241 ----ERRKIR---ALYPGAAMISHDCVPNMRHRFDDDMNIVFLAKRKIAKGEILSISYTQPLRST 298

Human   580 MGVAERQQKLRSQYFFDCACPACQ-TEAHRMAAGPRWEAFCCNSCGA-------PMQGDDVLRCG 636
            :   :|:..||....|||:|..|| .|.....||    |..|..|.|       |:......:|.
  Fly   299 I---QRRVHLRQAKCFDCSCARCQDPEELGSFAG----AQTCLKCKAGKIISLNPLLNSAPWKCQ 356

Human   637 ----SRSCAESAVSRDHLVSRLQDLQQQVRVAQKLLRDGELERAVQRLSGCQRDAESFLWAEHAV 697
                .||..:...|...|...|:.|.:...||                      .|.|::...| 
  Fly   357 LCNFKRSAKDVVTSDAELQQELESLDKTTPVA----------------------LEEFIYRHRA- 398

Human   698 VGEIADGLARACAALGDWQKSATHLQRSLYVVEVRHGPS---------------SVEMGHELFKL 747
                            |..::.||:.::.|.:...:|.:               .:::..||.||
  Fly   399 ----------------DLHETNTHILQAKYALTQLYGSAPGFAMEELSGESLNRKLQLCEELLKL 447

Human   748 AQIFFNGFAV---------PEALST--------------IQKAEEVLSLHCGPWDDEIQELQK-- 787
            |.||..|:::         .|||.|              ::.|.|:|.        ||:.:.|  
  Fly   448 ADIFDGGWSIFRGNLLIDMEEALVTQALRSKDPLDCEEKLRNAAEMLR--------EIRNIMKHE 504

Human   788 --MKSCLLD 794
              |:..||:
  Fly   505 PEMQQLLLE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815
TPR repeat 68..96 CDD:276809
TPR repeat 101..135 CDD:276809
TPR repeat 143..171 CDD:276809
SET 239..>269 CDD:394802
zf-MYND 296..335 CDD:460312 12/38 (32%)
SET_SMYD4 404..602 CDD:380934 48/238 (20%)
TPR_12 660..726 CDD:315987 8/65 (12%)
TPR_12 698..771 CDD:315987 19/110 (17%)
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312 12/38 (32%)
SET_SMYD <227..318 CDD:380997 26/111 (23%)
Blue background indicates that the domain is not in the aligned region.

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