DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and Smyd4-2

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster


Alignment Length:837 Identity:174/837 - (20%)
Similarity:285/837 - (34%) Gaps:260/837 - (31%)


- Green bases have known domain annotations that are detailed below.


Human     6 DEW-KSYL--LQKWASLPTSVQVTISTAETLRDIFLHSSSLLQPEDELF----LKRLSKGYLVGK 63
            |:| ::|.  |:..|:...|:.......:.:..:..|...:.:.:|.||    ..:..|.||:..
  Fly    37 DKWLRNYFGKLKSNAARVLSIFSDREVCDPVLGVLEHVQPVFKQKDALFSAQRRAQADKLYLMSG 101

Human    64 DSDAPLFYREEGNKKFQEKDYTGAAVLYSKGVSHSRPNTED--------MSLCHANRSAALFHLG 120
            ..|.     ||..:..|:     |.:..:..|..:.....|        ::|.:.:|::.|..||
  Fly   102 SGDG-----EESRELLQQ-----ALMAANLAVMRAPDRNADPVLDEGLTLALAYRSRASILIRLG 156

Human   121 QYETCLKDINRAQTHGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADVLP- 184
            :.|..|.|:..|...|...:......|:.|:....:|....|..::.           :|:.:| 
  Fly   157 EGEAALNDLKLAINFGLELKSSVDYYLKMAKAYAVMGEPARAEISLK-----------IAEKMPG 210

Human   185 ------QTLQRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPLK 243
                  ...::.|..:|.|  .|::.:|..| .||        ..|:.:|..||..:.|.....|
  Fly   211 CDATHIALCRKELSSVKPK--PKEATSEQVP-QLA--------HGESAELVGASKVVRLVETKDK 264

Human   244 GRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVP 308
            ||.:||.:.:..|::|:.|:...:.|.|           |.:.|       :||.|.|.....|.
  Fly   265 GRFVVANEGLRTGDVLLFEEPVAACLEP-----------SYFGT-------HCHHCFKRLHTPVS 311

Human   309 CDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLG--VFCHIALRLTLLVGFEDVRKIITKLC 371
            |..||...:||.:|:.:|...|||.||....|::..|  :.|.||||:.                
  Fly   312 CLHCSGIAFCSAQCMGEACSSYHRFECEYMDLMIGSGMSILCFIALRIF---------------- 360

Human   372 DKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVF-NLLPHTENH 435
                          .|..:|..||..:                        |.:| :|..|.|:.
  Fly   361 --------------TQAPSLEQGLATA------------------------NLLFEHLCSHEEDR 387

Human   436 SPEHKFLCALCVSALCRQLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTIWGVAMLRHMLQLQ 500
            .|:.....||....|.|.|:.:..........||.:.::..|           ..|:|..:..||
  Fly   388 QPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVNPTAVELQV-----------ATALLGLLQVLQ 441

Human   501 CNA----QAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQ 561
            .||    |...|.:|.      ...|:.|.||.|::...|..||.|.|:|:..|:.....:.|::
  Fly   442 YNAHQIYQTQVTEEHR------FDGSKTVYLAAGLYGTGSYFNHECWPSTACHFVGKKLVLTATR 500

Human   562 RIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFCCNSCGAP 626
            ..|..:.:...|||...:..:.|||:.||.:|.|.|:|.|||         ..|...        
  Fly   501 PHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ---------ENWPLL-------- 548

Human   627 MQGDDVLR--CGSRSCAESAVSRDHLVSRLQDLQQQVRVAQ------------KLLRDGELERAV 677
            .:.|..:|  |.|.:|:       :|:...:||.:.||..:            |:::..||.|..
  Fly   549 QKLDKQVRFWCTSANCS-------NLLKFPKDLAKDVRCPRCRKNISLKESVAKMIKIEELYREA 606

Human   678 QRLSGCQRDAESFLWAEHAVVGEIADGLARACAALGDWQKSATHLQRSLYVVEVRHGPSSVEMGH 742
            .|....|:..|:.                                                    
  Fly   607 ARAMEAQKTVEAI---------------------------------------------------- 619

Human   743 ELFKLA-QIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDEIQELQKMKSCLLDLPPT 798
            ||||.: .:||...|:|.                   .|.|...|.:..||.|...|
  Fly   620 ELFKESLDMFFQVAALPH-------------------KDTIVAQQSLHKCLSDTGTT 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815 21/112 (19%)
TPR repeat 68..96 CDD:276809 4/27 (15%)
TPR repeat 101..135 CDD:276809 10/41 (24%)
TPR repeat 143..171 CDD:276809 4/27 (15%)
SET 239..>269 CDD:394802 8/29 (28%)
zf-MYND 296..335 CDD:460312 15/38 (39%)
SET_SMYD4 404..602 CDD:380934 49/202 (24%)
TPR_12 660..726 CDD:315987 9/77 (12%)
TPR_12 698..771 CDD:315987 8/73 (11%)
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813 24/138 (17%)
SET_SMYD4 249..541 CDD:380934 93/380 (24%)
zf-MYND 299..338 CDD:460312 15/38 (39%)

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