DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and SmydA-7

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster


Alignment Length:596 Identity:123/596 - (20%)
Similarity:193/596 - (32%) Gaps:187/596 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   221 LREENEQLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKW 285
            ::|..|.:.:|.       |...||.|||:..|.||:.:::|...        |..||      |
  Fly     1 MQEFGENIQHAH-------DEKLGRHLVASIAIEPGDTILEERPL--------LVAPH------W 44

Human   286 DTRVTNGDLYCHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHI 350
            :..    .|.|.:||:.:.  |.|..|.....| .:|.|     :...||               
  Fly    45 ECH----QLKCAQCLQESY--VICRRCQVFPLC-MDCNQ-----HDEFEC--------------- 82

Human   351 ALRLTLLVGFEDVRKIITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDIN 415
                          :..|....|...|||.:.         |:|:....|...::|.|    ...
  Fly    83 --------------EFFTSGAGKALCKDILVK---------NFGICGLLKLLLLLENP----RTK 120

Human   416 GKYENNYNAVFNLLPHTENHS--PEHKFLCALCVSALCRQLEAASLQAIPTERIVNSSQLKAAVT 478
            |..:...:...||..:.:...  .||:   .|.|..|   :|:.....:||:             
  Fly   121 GDCQMLIDVPINLSDYRDGEGMWQEHE---ELVVRPL---MESGLADVLPTQ------------- 166

Human   479 PELCPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCS 543
             ||..|      |:..|.:::..|     :.:.|...|..:         .|||...:.|.|.|.
  Fly   167 -ELTSD------ALHAHCIRIDSN-----SFEVTAKDGDTL---------KGIFVWGATLPHHCV 210

Human   544 PNTSVSFISTV-ATIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPAC--QTE 605
            |||.|:..... ..:.|:..::.|..|.:.|  ....||.::||.:||.....:|.|..|  .||
  Fly   211 PNTVVALDEQFNMKLYAAVPLQPGDIIYNSY--TNPLMGTSQRQHQLRLSRRLECICSRCLDPTE 273

Human   606 AHRMAAGPRWEAFCCNSCG--APMQGDDVLRCGSRSCAE-------------SAVSRDHLVSRLQ 655
                 .|....:..|..|.  :..:.|...:.|...|.:             .|.....||..:.
  Fly   274 -----MGTHMSSLKCKECPGFSVCEIDSNGKLGDWRCPDCRALLTAAEVHELQAAVGSALVDAMG 333

Human   656 DLQQQVRVAQKLLRD-GELERAVQRLSGCQRDAESFLWAEHAVVGEIADGLA---RACAALGDWQ 716
            |||    |.:.||.. |.|                 |...|.::.:|...:|   ||.|.:....
  Fly   334 DLQ----VYEALLTQYGPL-----------------LHPNHFMLLDIKQNIASILRAAALMNSMD 377

Human   717 KSATHLQRSLYVVEVRHGPSSVEMGHELFKLAQIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDE 781
            :....|.           ...||:..:|..:.:....|.:   .|..|...|.:|:|      .|
  Fly   378 QPCKKLL-----------ARRVELCSDLLPVCRAVVPGIS---KLYAIGLFEYLLAL------VE 422

Human   782 IQELQKMKSCL 792
            :.|||..:|.|
  Fly   423 LVELQFAESDL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815
TPR repeat 68..96 CDD:276809
TPR repeat 101..135 CDD:276809
TPR repeat 143..171 CDD:276809
SET 239..>269 CDD:394802 10/29 (34%)
zf-MYND 296..335 CDD:460312 9/38 (24%)
SET_SMYD4 404..602 CDD:380934 43/200 (22%)
TPR_12 660..726 CDD:315987 13/69 (19%)
TPR_12 698..771 CDD:315987 13/75 (17%)
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 25/105 (24%)
Blue background indicates that the domain is not in the aligned region.

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