DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and Smyd4-4

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster


Alignment Length:621 Identity:147/621 - (23%)
Similarity:242/621 - (38%) Gaps:147/621 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    71 YREEGNKKF--QEKDYTGAAVLYSKGVSHSRPNTEDMSLCHANRSAALFHLGQYETCLKDINRAQ 133
            :|..||::|  :.::|..|..||:|.:.::.||:|.:|:.:|||||.||...:|..||.:|..|:
  Fly    71 FRMLGNEQFSLKNRNYFQALELYNKSICYAEPNSEHLSIGYANRSAVLFEWKRYRQCLDNIKLAR 135

Human   134 THGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADVLPQTLQRNLHRLKMKM 198
            ...||.||..|:..|:.:|           |.:.|.:.        .||:|       :..|:..
  Fly   136 QANYPARLSHKLDKRERDC-----------QQLLDQQP--------PDVVP-------YEFKLSF 174

Human   199 QEKDSLTESFPAALAKTLEDA-ALREENEQLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQE 262
            :         |.|....:.|. .|||                ...:||.:|..:|:..|:|:..|
  Fly   175 E---------PHAQVPFIADCLELRE----------------TAAEGRFVVTNRDLAVGDLVSVE 214

Human   263 DAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHT-LATVPCDGCSYAKYCSQECLQQA 326
            :.|.|.|    |.|..:              :.|..|.:.. |..:|||.|....:||:||...|
  Fly   215 EPFCSTL----LTPMRY--------------IRCATCKRENYLTLIPCDSCCSTMFCSEECKSIA 261

Human   327 WELYHRTECPLGGLLLTL--GVFCHIALRLTL--LVGFEDVRKIITKLCDKISNKDICLPESNNQ 387
            .:.|||.|||:...|..:  .:.| ||||.||  |..|..:.::| ..|::..|:|.|..:    
  Fly   262 MQTYHRYECPIIDFLNRMFNKIHC-IALRTTLVALNIFPSIEELI-DFCEQEQNQDKCAFD---- 320

Human   388 VKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHTENHSPEHKFLCALCVSALCR 452
               |||.          ..||          |.:|.|:..|:.:....|....|.    .|.:|.
  Fly   321 ---LNYN----------ELTP----------EEHYRAIHGLVTNQHLRSVSDLFQ----RSVVCA 358

Human   453 QLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGS 517
            .|:...::..|.:..:...:           .|..:...:.||:.....|...:..::.......
  Fly   359 VLKHFIIEYTPVKEYLGGEE-----------GVNFFTDLLFRHLQTSPSNMHGIDLVEQVNETKD 412

Human   518 IVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGPHKSRMGV 582
            ..|.|      :|.:..:||:||||:|||...:..|.|.:...:.|:.|..:...||.|.:....
  Fly   413 DQTHS------SGAYAFLSLINHSCAPNTVRIYEGTKAYMFVLRPIKAGNVLYDNYGAHFAICSK 471

Human   583 AERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFCCNSCGAPMQGDDVLRCGSRSCAESAVSR 647
            .:|.::|..||.|||.|..|:.........|       :....|...||.....|....:.|||.
  Fly   472 EQRLKRLSLQYRFDCKCEGCELNYPMFGMMP-------HKATVPSVTDDTELALSSYNYDFAVSN 529

Human   648 -------------DHLVSRLQDLQQQVRVAQKLLRD 670
                         |:...::...::.:::|..::.|
  Fly   530 YRKYCDFLTQYGDDYPCEQISSAEECLKMALHIMAD 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815 34/101 (34%)
TPR repeat 68..96 CDD:276809 9/26 (35%)
TPR repeat 101..135 CDD:276809 15/33 (45%)
TPR repeat 143..171 CDD:276809 5/27 (19%)
SET 239..>269 CDD:394802 9/29 (31%)
zf-MYND 296..335 CDD:460312 15/39 (38%)
SET_SMYD4 404..602 CDD:380934 43/197 (22%)
TPR_12 660..726 CDD:315987 2/11 (18%)
TPR_12 698..771 CDD:315987
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 95/394 (24%)
zf-MYND 230..270 CDD:460312 15/39 (38%)
Blue background indicates that the domain is not in the aligned region.

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