DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and SmydA-5

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster


Alignment Length:596 Identity:115/596 - (19%)
Similarity:179/596 - (30%) Gaps:223/596 - (37%)


- Green bases have known domain annotations that are detailed below.


Human   305 ATVPCDGCSYAKYCSQECLQQAWELYHRTEC---------PLGGLLLTLGVFCHIALRLTLLVGF 360
            |:..|..|...:||.:|..:|.|. .|:..|         .||..|                   
  Fly    14 ASQACTRCKMVRYCDREHQKQHWP-QHKRRCRPFSEEQDAELGRYL------------------- 58

Human   361 EDVRKIITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAV 425
                    |:...|:...|...|....|....| |.:::|..:.|  |..||             
  Fly    59 --------KVTQNIAAGQIVFIEEPLVVGPKWY-LSDADKEASNV--PCVGC------------- 99

Human   426 FNLLPHTENHSPEHKFLCALC----VSALCR--QLEAASL---QAIPTERIVNSSQ--------- 472
                 :|.....:|:  |..|    .||.|:  .:|.:.|   ...||.....|..         
  Fly   100 -----YTPCRLGKHQ--CRRCRWPVCSAGCKHESMECSVLSLGSGSPTRADARSLNDYFRGDALL 157

Human   473 -LKAAVTPELCPDVTIWGVAMLRHMLQLQCNAQA----------------------MTTIQHTGP 514
             ||..:.....|  |.|..     :|::|.:.:.                      :..::.|.|
  Fly   158 VLKCLLLQRQSP--TKWSA-----LLEMQSHEEERKGTDLYEEAEKRVVTYLQKRFLCRLKQTNP 215

Human   515 K--------------GSIVTDSRQVRLATGI-----FPVISLLNHSCSPNTSVSFISTV--ATIR 558
            .              |.|.|:...:.|.:|:     |....::.|:|.||....|.:..  ..:|
  Fly   216 NLLTDCGPEMLHRLCGIIETNFMVIELPSGVELSGLFRQACMMEHACQPNCDFQFDNKTQQVAVR 280

Human   559 ASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPAC--QTEAHRMAAGPRWEAFCC- 620
            |...:|||..:...|  .....|...||..||....|.|.|..|  .||     .|....|..| 
  Fly   281 AGCDLRKGDHLRITY--TNILWGTQLRQHHLRLTKHFSCRCSRCLDPTE-----YGTYISALTCL 338

Human   621 ----NSCGA------PMQGDDVLRCGSRSC------AESAVSRDHLVSRLQDL--------QQQV 661
                .:||.      |:..:...:|.  :|      |..|..:.|:..:::.|        |.::
  Fly   339 GDVNQTCGGTHLPVDPLDENTQWKCD--TCPMIVDGAYVAELQSHMTEQVEGLLAGCPSANQVEL 401

Human   662 RVA---------------------QKLLRDGELERAVQRLSGCQRDAESFLWAEHAVVGEIADGL 705
            .:|                     |....:..||..|  ||..|.:.:..|..|          |
  Fly   402 LLARLTHMLHPNHFHTFNLKHTLIQLYGNEAGLELGV--LSNTQLERKLRLCGE----------L 454

Human   706 ARACAALGDWQKSATHLQRSLYV----VEVRH--------GPSSVEMGHELFKLAQIFFNGFAVP 758
            ...|..|..:.     ::.::||    :||.|        .|:.   |..|..|||     ..:.
  Fly   455 YNVCRRLDPYS-----IKLAIYVTVILIEVAHTLQEQARRAPAE---GTSLLGLAQ-----SRLR 506

Human   759 EALSTIQKAEE 769
            ||...::|.:|
  Fly   507 EAHMVLEKEQE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815
TPR repeat 68..96 CDD:276809
TPR repeat 101..135 CDD:276809
TPR repeat 143..171 CDD:276809
SET 239..>269 CDD:394802
zf-MYND 296..335 CDD:460312 9/29 (31%)
SET_SMYD4 404..602 CDD:380934 50/259 (19%)
TPR_12 660..726 CDD:315987 13/86 (15%)
TPR_12 698..771 CDD:315987 18/84 (21%)
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312 9/29 (31%)
SET_SMYD <232..322 CDD:380997 24/91 (26%)
Blue background indicates that the domain is not in the aligned region.

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