DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMYD4 and dao

DIOPT Version :10

Sequence 1:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens
Sequence 2:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster


Alignment Length:833 Identity:183/833 - (21%)
Similarity:279/833 - (33%) Gaps:252/833 - (30%)


- Green bases have known domain annotations that are detailed below.


Human     4 PVDEWKSYLLQKWASLPTSVQVTISTAETLRDIFLHSSSLLQPEDELFLKRLSKGYLVGKDSDAP 68
            ||.:::.::| ||             .:.||    |.:...:.|:|  .:||             
  Fly   138 PVLDFRPHVL-KW-------------FQHLR----HQTGHFKSEEE--SRRL------------- 169

Human    69 LFYREEGNKKF-QEKDYTGAAVLYSKGV--SHSRPNTEDMSLCHANRSAALFHLGQYETCLKDIN 130
               ||.||..: :|:....|:.|:::.:  :.:| ||...:|.|||||..||..|.|.....|..
  Fly   170 ---REAGNDSYRKERHPLKASDLFTEAIFLAPAR-NTLAAALAHANRSLVLFDCGLYAESYDDCL 230

Human   131 RAQTHGYPERLQPKIMLRKAECLVALGRL---QEASQTISDLERNFTATPALADVLPQTLQRNLH 192
            .|...||||...|.|.||:|.|.:.|...   :|....:..:|.|........::..|.....:.
  Fly   231 CALDLGYPEEYLPLIKLRQAACALKLRNFALCEEHLHELLHIELNQVFEARTHELWHQCEVLKVE 295

Human   193 RLKMKMQEKDSL----TESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPLKGRCLVATKDI 253
            |.:|.:|..|.|    :::|..|               .|.|:||             |..|:.:
  Fly   296 RFEMAVQTGDDLDINDSKAFEIA---------------WLDNSSS-------------LHTTRAV 332

Human   254 LPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVPCDGCS--YAK 316
            ....|:.:.:| |:::..|             :.||      |..|........||..||  ...
  Fly   333 AKNALIFESEA-VAMVPSG-------------NCRV------CDYCGITQFIPFPCIYCSNRLVV 377

Human   317 YCSQEC-LQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGFEDV-----------RKIITK 369
            |||::| .:.|  ..|..||           |.|   ::.|...|.:|           |.:||.
  Fly   378 YCSRQCRFKHA--AIHAVEC-----------FGH---QIELFESFGEVFGMPRLLQLAFRMLITG 426

Human   370 LCDKISNKDIC--LPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHT 432
            |.:.:.:   |  .|..:.....:|.||.|.:             ||      .|:||..|....
  Fly   427 LPELLGH---CRKKPTLSKLWSAINGGLQERQ-------------DI------AYSAVLRLERLK 469

Human   433 ENHSPEHKFLCALCVSAL------CR----QLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTI 487
            |....:.....||....|      |.    |||    :::||     :|::.:|....||..:.:
  Fly   470 EERPTDTVIALALAAHILSIYLSKCTTFFDQLE----KSLPT-----ASRMSSAEWELLCAALLM 525

Human   488 WGVAMLRHMLQLQCNAQAMTTIQHT-GPKGSIVTDSRQVRLATG---------------IFP-VI 535
            ..:..|||.....|.:..:....|. .|.......:..:||..|               ::| .:
  Fly   526 RHIGQLRHRSLTACRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVAVVSYSVYPDTL 590

Human   536 SLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACP 600
            :|..||||......|.....|..|...:..|..|.:|:.....:....|.:.|...:....|.|.
  Fly   591 NLCRHSCSSTICAKFSGRTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQLLESGIRCHCN 655

Human   601 ACQT--------EAHRMAA-GPR-WEAFCCNSC-GAP--------------MQGDDVLRCGSRSC 640
            |||.        :.||... .|. .|.|..|:. .||              ..|.|::.|  ..|
  Fly   656 ACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSEEYTQPEFNGADLIMC--PHC 718

Human   641 AESAVSRDHLVSRLQDLQQQVRVAQKL---------LRDGELERAVQRLSGCQRDAESFLWAEHA 696
            .|                     .|||         |.|.||.....:|......||:.|...|.
  Fly   719 GE---------------------YQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLMDLHE 762

Human   697 VVGEIADGLARAC--------AALGDWQ--KSATHLQRSLYVVEVRHGPSSVE 739
            ....:|..|...|        ..|.||:  |..:.|:..|..|..::|..|:|
  Fly   763 CKVALARLLLEQCLMVHREGATVLDDWEFNKLGSILRSVLPSVMAQYGGQSIE 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815 34/110 (31%)
TPR repeat 68..96 CDD:276809 7/30 (23%)
TPR repeat 101..135 CDD:276809 14/33 (42%)
TPR repeat 143..171 CDD:276809 8/30 (27%)
SET 239..>269 CDD:394802 5/29 (17%)
zf-MYND 296..335 CDD:460312 12/41 (29%)
SET_SMYD4 404..602 CDD:380934 45/224 (20%)
TPR_12 660..726 CDD:315987 20/84 (24%)
TPR_12 698..771 CDD:315987 13/52 (25%)
daoNP_609742.1 TPR repeat 200..235 CDD:276809 15/35 (43%)
TPR repeat 243..270 CDD:276809 8/26 (31%)
SET <459..657 CDD:394802 43/206 (21%)

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