DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acvrl1 and tkv

DIOPT Version :9

Sequence 1:NP_001264184.1 Gene:Acvrl1 / 11482 MGIID:1338946 Length:517 Species:Mus musculus
Sequence 2:NP_787990.1 Gene:tkv / 33753 FlyBaseID:FBgn0003716 Length:575 Species:Drosophila melanogaster


Alignment Length:502 Identity:227/502 - (45%)
Similarity:298/502 - (59%) Gaps:66/502 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    42 PSKLVNCTCESPHCKRPFCQGSWCTVVLVREQGRHPQVY-RGCGSLNQELCLG-RPTE----FL- 99
            |..:.|.|||:    ||   |..|...:       .|:| ...|...:|...| .|.|    || 
  Fly    90 PDNVSNGTCET----RP---GGSCFSAV-------QQLYDETTGMYEEERTYGCMPPEDNGGFLM 140

Mouse   100 ------------NHHCCYR-SFCNHNVSLMLEATQTP---SEEPEV-----DAHLPLILGP-VLA 142
                        |..||.: .|||.:    |..|.||   :..|::     ..|...:.|. :::
  Fly   141 CKVAAVPHLHGKNIVCCDKEDFCNRD----LYPTYTPKLTTPAPDLPVSSESLHTLAVFGSIIIS 201

Mouse   143 LPVLVALGALGLWRVRRRQE--KQRDLHSDLGESSLILKASEQADSMLGDFLDSDCTTGSGSGLP 205
            |.|.:.:.|...:..:||::  ||..|.:.:..|.|         |.|...::.  ::|||||||
  Fly   202 LSVFMLIVASLCFTYKRREKLRKQPRLINSMCNSQL---------SPLSQLVEQ--SSGSGSGLP 255

Mouse   206 FLVQRTVARQVALVECVGKGRYGEVWRGSWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI 270
            .|||||:|:|:.:|..||||||||||...|..|.||||.|.:.:|.|||||||||.|||:|||||
  Fly   256 LLVQRTIAKQIQMVRLVGKGRYGEVWLAKWRDERVAVKTFFTTEEASWFRETEIYQTVLMRHDNI 320

Mouse   271 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPQLALRLAVSAACGLAHLHVEIFGTQ 335
            |||||:|:....|.||:.|||.|||.|||:|:|....:.||....||.|.|.||||||.|||||.
  Fly   321 LGFIAADIKGNGSWTQMLLITDYHEMGSLHDYLSMSVINPQKLQLLAFSLASGLAHLHDEIFGTP 385

Mouse   336 GKPAIAHRDLKSRNVLVKSNLQCCIADLGLAVMHSQSSDYLDIGNNPRVGTKRYMAPEVLDEHIR 400
            |||||||||:||:|:|||.|.||.|||.||||.::...|.:.|..||||||:||||||||.:.:.
  Fly   386 GKPAIAHRDIKSKNILVKRNGQCAIADFGLAVKYNSELDVIHIAQNPRVGTRRYMAPEVLSQQLD 450

Mouse   401 TDCFESYKWTDIWAFGLVLWEIARR--TIING----IVEDYRPPFYDMVPNDPSFEDMKKVVCVD 459
            ...||.:|..|:::.||||||:.||  |.::|    ..|||..|::|:||:||:||||..||||.
  Fly   451 PKQFEEFKRADMYSVGLVLWEMTRRCYTPVSGTKTTTCEDYALPYHDVVPSDPTFEDMHAVVCVK 515

Mouse   460 QQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKL 506
            ...|.||:|...|.||:.::::|:|||:|||:.||||||:||||.:|
  Fly   516 GFRPPIPSRWQEDDVLATVSKIMQECWHPNPTVRLTALRVKKTLGRL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acvrl1NP_001264184.1 LU 48..112 CDD:299177 22/83 (27%)
TGF_beta_GS 187..214 CDD:285687 13/26 (50%)
STKc_ACVR1_ALK1 210..507 CDD:271044 174/303 (57%)
Pkinase_Tyr 216..503 CDD:285015 167/292 (57%)
tkvNP_787990.1 Activin_recp 81..171 CDD:279413 25/98 (26%)
GS 238..266 CDD:197743 15/29 (52%)
S_TKc 267..557 CDD:214567 165/289 (57%)
STKc_BMPR1 270..562 CDD:271046 168/291 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834699
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.