DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGLYRP3 and PGRP-LB

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster


Alignment Length:166 Identity:67/166 - (40%)
Similarity:95/166 - (57%) Gaps:8/166 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   217 IIKRSAWEARETHCPK----MNLPAKYVIIIHTAGTSCTVST-DCQTVVRNIQSFHMDTRNFCDI 276
            ::.||.|.||   .||    ...||.||||.|:...:...|| ||...:|::|.||...|.:.||
  Fly    55 LLSRSDWGAR---LPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDI 116

Human   277 GYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEG 341
            ||.|.:|.||.:|.|.|:::.|:|...:||.::||..||.:..:.|....|:||::||...|.:|
  Fly   117 GYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLIAFGVFKG 181

Human   342 YLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH 377
            |:.|.|.|:||..|.:...||..|:..||:||||.|
  Fly   182 YIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTH 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 56/142 (39%)
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 56/142 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.