DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-SB2

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_001261970.1 Gene:PGRP-SB2 / 39869 FlyBaseID:FBgn0043577 Length:191 Species:Drosophila melanogaster


Alignment Length:140 Identity:51/140 - (36%)
Similarity:72/140 - (51%) Gaps:32/140 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   217 IIKRSAWEARETHC--------PKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNF 273
            |:.||:|      |        |::.:|.:.:||.||....|.....||.|:|.|::.|| .|.|
  Fly    19 IVPRSSW------CPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRADHM-RRKF 76

Human   274 CDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKP------PNAAALEAAQD 332
            .||||:||:|.||.:|||:|:.|:|.|...:|..::||||||.|...|      ||         
  Fly    77 RDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGCPNPHPN--------- 132

Human   333 LIQCAVVEGY 342
              :||...|:
  Fly   133 --RCAASPGF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 51/140 (36%)
PGRP-SB2NP_001261970.1 PGRP 18..>129 CDD:128941 46/116 (40%)
Blue background indicates that the domain is not in the aligned region.

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