DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-LF

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_648299.3 Gene:PGRP-LF / 39064 FlyBaseID:FBgn0035977 Length:369 Species:Drosophila melanogaster


Alignment Length:344 Identity:96/344 - (27%)
Similarity:151/344 - (43%) Gaps:57/344 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    42 FVSISQFIHKGRNDTPTIVSRKEW-GARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRG 105
            |:.:..|.....|....|:.|.|| |..|......|.|||:.||........|:|:.||...::.
  Fly    42 FMWMMSFSTHSPNKGLHILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKT 106

Human   106 LQSHSVYTIGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYNNISLGIAFFGNKIGSSPSPAAL 170
            :|:..:.:.||.|:.||||||.||::|.|.||:|||.|..||..||:.|||.|..:...|....:
  Fly   107 IQAFHMKSFGWVDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQI 171

Human   171 SAAEGLISYAIQKGHLSPRY-------IQPL-------------------------LLKEETCLD 203
            .||:.|:...::...|.|.|       :.|.                         ||..||.  
  Fly   172 EAAKRLMDEGVRLHRLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRFTQDPTSLRLLSNETV-- 234

Human   204 PQHPVMPRKVCPNIIKRSAWEARETHCP--KMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSF 266
                        .|:.|..|.|:....|  .:.||.:.|..:.|...||....:|...||.:|::
  Fly   235 ------------KIVTRPYWLAQPPIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNW 287

Human   267 HMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQ 331
            |:::..:.||.|:|:...|..:||..||..........:::.  :||||      |:::..:.|.
  Fly   288 HIESNGYKDINYNFVAAGDENIYEARGWDHSCEPPKDADELV--VAFIG------PSSSNKKIAL 344

Human   332 DLIQCAVVEGYLTPNYLLM 350
            :||:..:..|:::.||.|:
  Fly   345 ELIKQGIKLGHISKNYSLI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941 52/170 (31%)
PGRP 215..355 CDD:128941 37/138 (27%)
PGRP-LFNP_648299.3 PGRP 57..199 CDD:128941 51/141 (36%)
PGRP 236..363 CDD:470657 36/134 (27%)

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