DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-LC

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_648298.1 Gene:PGRP-LC / 39063 FlyBaseID:FBgn0035976 Length:520 Species:Drosophila melanogaster


Alignment Length:164 Identity:49/164 - (29%)
Similarity:83/164 - (50%) Gaps:6/164 - (3%)


- Green bases have known domain annotations that are detailed below.


Human   218 IKRSAWEAR--ETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHF 280
            ::|..|.|:  :...|.:.||...||.:.|...:|:....|...||.:|::.:::...|||.|:|
  Fly   356 VERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNF 420

Human   281 LVGQDGGVYEGVGWHIQGSH--TYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYL 343
            |:|.||.||.|.||:..|:|  ...::..:|..|:||.|....|:|..|...:.|::..|..|.:
  Fly   421 LIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKI 485

Human   344 TPNYLLMGHSDVVNILS--PGQALYNIISTWPHF 375
            .|:|.....|.::..::  ...|||...:.|.|:
  Fly   486 APSYRFTASSKLMPSVTDFKADALYASFANWTHW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 44/140 (31%)
PGRP-LCNP_648298.1 PGRP 356..490 CDD:128941 42/133 (32%)
Blue background indicates that the domain is not in the aligned region.

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