DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-LA

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster


Alignment Length:174 Identity:51/174 - (29%)
Similarity:76/174 - (43%) Gaps:19/174 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   215 PN------IIKRSAWEA-RETHCPKMNLPAK----YVIIIHTAGTS--CTVSTDCQTVVRNIQSF 266
            ||      ::.|..|.| :.:|  .:.:|.|    ||:|.|....|  |.....|...:|.||..
  Fly   175 PNLGNGHLVVDREQWGASKNSH--GLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDS 237

Human   267 HMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQ 331
            .:..:...||..:|.|.::|.:|.|.||  ..::||.  :..|.|.|:|.:....|....||..|
  Fly   238 AIAEKGLPDIQSNFYVSEEGNIYVGRGW--DWANTYA--NQTLAITFMGDYGRFKPGPKQLEGVQ 298

Human   332 DLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHF 375
            .|:..||....:..:|.|:..:......|||..:|..|..||||
  Fly   299 FLLAHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 42/152 (28%)
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 40/146 (27%)
Blue background indicates that the domain is not in the aligned region.

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