DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-LD

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_001137893.1 Gene:PGRP-LD / 3771920 FlyBaseID:FBgn0260458 Length:327 Species:Drosophila melanogaster


Alignment Length:299 Identity:69/299 - (23%)
Similarity:103/299 - (34%) Gaps:108/299 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   156 FFGNKIGSSPSPAALSAA-----------------EGLISYAIQKGHLSPRYIQPLL------LK 197
            :|......||||||:|.:                 ||:.|.:           .|||      :|
  Fly    51 YFATIARRSPSPAAVSQSSYGSLGSSQDIHIRVDKEGVASES-----------TPLLAAAQRSIK 104

Human   198 EETCLDPQHPVMPRKVCPNIIKRSA--------WEA-------------------RETHCP---- 231
            ..:.|...  |......|:..:|:.        |.:                   |:|..|    
  Fly   105 TSSSLTAS--VSASSTTPSNCRRNPTLHEDCFNWRSVGLLVMCASALALAAYLLWRQTQTPDFGY 167

Human   232 -----------KMNLPAK----------YVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCD 275
                       .|.|..:          .||..||....|  ..||..|:..::..|:.     :
  Fly   168 RLSIVGHGIWSDMELQGRGTLFDPIGVGTVIFTHTGSNEC--HDDCPDVLHKLERSHVG-----E 225

Human   276 IGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDI-ALGIAFIGYFVEKPPNAAALEAAQDLIQCAVV 339
            :.|:|||..|..|:|..|||.:..:....|.| :|.:||:|.|..:||....|.|||.||..::.
  Fly   226 LPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSLVMAFVGNFSGRPPIDCQLMAAQALILESLK 290

Human   340 EGYLTPNY---LLMGHSDVVNILSPGQALYNIISTWPHF 375
            ...|.|.|   :|..::|         ||...:..|||:
  Fly   291 RRILQPIYQLFVLGSYTD---------ALQRELRHWPHY 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941 12/55 (22%)
PGRP 215..355 CDD:128941 46/195 (24%)
PGRP-LDNP_001137893.1 PGRP 169..306 CDD:128941 40/143 (28%)

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