DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-SC1b

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_610409.1 Gene:PGRP-SC1b / 35861 FlyBaseID:FBgn0033327 Length:185 Species:Drosophila melanogaster


Alignment Length:70 Identity:14/70 - (20%)
Similarity:26/70 - (37%) Gaps:14/70 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     5 QALYMCTDINPKAAACTLETARCNRVHLQPVITDLVQGLLPRLKGKVDLLVFNPPYVVTPPEEVG 69
            ::.:..||.|..:.....:....|.:.|...:|:|::.|:            .||.:...|.  |
  Fly    59 ESSFTVTDCNCSSLIERTDQLDANELQLDAKVTELIEDLI------------KPPTITNGPN--G 109

Human    70 SHGIE 74
            ..|.|
  Fly   110 PAGCE 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941 6/18 (33%)
PGRP 215..355 CDD:128941
PGRP-SC1bNP_610409.1 PGRP 22..163 CDD:128941 14/70 (20%)
Blue background indicates that the domain is not in the aligned region.

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