DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP3 and PGRP-SC1a

DIOPT Version :10

Sequence 1:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens
Sequence 2:NP_610407.1 Gene:PGRP-SC1a / 35859 FlyBaseID:FBgn0043576 Length:185 Species:Drosophila melanogaster


Alignment Length:173 Identity:62/173 - (35%)
Similarity:93/173 - (53%) Gaps:27/173 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   217 IIKRSAWEARETHCPKMNLPAK----------YVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTR 271
            ::.::.|..|         .||          |.||.||||:.|.....|..|::::|::|||:.
  Fly    24 VVSKAEWGGR---------GAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSL 79

Human   272 NFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYF----VEKPPNAAALEAAQD 332
            .:.||||:||:|.||.||||.||:..|:|...:|..::||:|:|.:    :|  ||  .:.|||.
  Fly    80 GWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLE--PN--MISAAQQ 140

Human   333 LIQCAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHF 375
            |:..||..|.|:..|:|.||..|.....||..::|.|..|.|:
  Fly   141 LLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 55/151 (36%)
PGRP-SC1aNP_610407.1 PGRP 22..163 CDD:128941 55/151 (36%)
Blue background indicates that the domain is not in the aligned region.

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