DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ferd3l and CG33557

DIOPT Version :9

Sequence 1:NP_277057.1 Gene:Ferd3l / 114712 MGIID:2150010 Length:168 Species:Mus musculus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:101 Identity:33/101 - (32%)
Similarity:54/101 - (53%) Gaps:17/101 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    65 EGDEVEYE-DPEEEEEEGEGRGRVASLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRR 128
            |..::..| :|..:|.:|..|       .||.|:::         |.|||.|.||:|.|::.||.
  Fly    38 EDSQIGQEANPGGQENQGNHR-------RRPPRQKI---------NARERYRTFNVNSAYEALRN 86

Mouse   129 KVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEE 164
            .:||....::||:||.:|||..||:.::..|::..|
  Fly    87 LIPTEPMNRKLSKIEIIRLASSYITHLSSTLETGTE 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ferd3lNP_277057.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88 6/23 (26%)
bHLH domain 104..159 22/54 (41%)
HLH 104..156 CDD:278439 22/51 (43%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839657
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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