DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actg2 and Arp10

DIOPT Version :9

Sequence 1:NP_033740.2 Gene:Actg2 / 11468 MGIID:104589 Length:376 Species:Mus musculus
Sequence 2:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster


Alignment Length:389 Identity:85/389 - (21%)
Similarity:155/389 - (39%) Gaps:68/389 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :|...:|.|.|:...|.|||.:..||.:.|:.|       ||...|.:          ||     
  Fly     9 QEKPPIVLDIGTAYTKLGFAAEAYPRKIMPTEV-------VMTTTGIR----------KR----- 51

Mouse    69 KYPIEHGIITNWDDMEKIWHH-------SFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFE 126
                    :.::|..|:::..       .|:..|.|:|:|...:|.|........||.:.:::|.
  Fly    52 --------LFDYDTPEELYDQLVDFLQTIFFKHLLVSPKERKFVLVENVFGSTVLRETLARVLFV 108

Mouse   127 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
            .|:|.::......:::|......|.:|:|.|...|..:|::.|..:..|.......|..:...:.
  Fly   109 HFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYGGSAIHAEIK 173

Mouse   192 KILTERGY--SFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNE 254
            :.|.|.|.  |.:|   ..::.|||.:.|:|.   ..|.|.|.::....:....||...|...|:
  Fly   174 RQLVESGVKESLLT---ESVLEDIKVRTCFVT---TMERAKARANGDENQPTPAPDVDYIVSDND 232

Mouse   255 ---------RFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI 310
                     |....|.:|:.|   .|...:......||:.|.:|:|:.|..:..|.||.:|..|:
  Fly   233 AVIQVPGLLRESAYEIMFEAS---NERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGL 294

Mouse   311 ADRMQKEITALAP----------STMKIKII-APPERKYSVWIGGSILASLSTFQQMWISKPEY 363
            ..|:::|:..|..          ..::.|.. |..::.::.|:||::..:....|...:.|..|
  Fly   295 LARLRQELQHLLTEDPFYAERFHGELQFKFFNAVGKQNFTAWLGGALCGATDLIQTRSLVKETY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Actg2NP_033740.2 PTZ00281 1..376 CDD:173506 85/389 (22%)
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 80/367 (22%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 84/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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