DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERMAP and fred

DIOPT Version :9

Sequence 1:NP_001017922.1 Gene:ERMAP / 114625 HGNCID:15743 Length:475 Species:Homo sapiens
Sequence 2:NP_608812.3 Gene:fred / 33613 FlyBaseID:FBgn0051774 Length:1447 Species:Drosophila melanogaster


Alignment Length:468 Identity:89/468 - (19%)
Similarity:143/468 - (30%) Gaps:193/468 - (41%)


- Green bases have known domain annotations that are detailed below.


Human    17 PLVFLRLSVHVSGHAGDAGKFHVALLGGTAELLCPLSLWPGTVPKEVRWLRSPFPQRSQAVHIFR 81
            |:||:.            .|.|.|..|.|..:.|.::..|.  |..|.||:...|.       ||
  Fly   317 PIVFIE------------SKTHEAEEGETVLIRCNVTANPS--PINVEWLKEGAPD-------FR 360

Human    82 DGKDQDEDLMPEYKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGNLSKEDTVILQVAAP 146
                        |.|..:.:     ||       ||.|..|:|.|        :...::...::.
  Fly   361 ------------YTGELLTL-----GS-------VRAEHAGNYIC--------RSVNIMQPFSSK 393

Human   147 SVGSLSPSAVALAVILPVLVLLIMVCLCLIWKQRRAKEKLLYEHVTEVDNLLSDHAKEKGKLHKA 211
            .|..:..|.|||.|                 :.|..:     .::|.               :|.
  Fly   394 RVEGVGNSTVALLV-----------------RHRPGQ-----AYITP---------------NKP 421

Human   212 VKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRRQPVPDNPQRF 276
            |..:.:.:.|..:|...||...:..:.. .:|.|..:.:.||::                .|| :
  Fly   422 VVHVGNGVTLTCSANPPGWPVPQYRWFR-DMDGDIGNTQKILAQ----------------GPQ-Y 468

Human   277 DFVVSILGSE--YFTTGCH-YWEVYVGDKTKWILGV----------------------CSESVSR 316
            ....:.||||  |.   || ..|:.:|.....||.|                      .:.:.|.
  Fly   469 SIPKAHLGSEGKYH---CHAVNELGIGKIATIILEVHQPPQFLAKLQQHMTRRVGDVDYAVTCSA 530

Human   317 KGKVTASPANGHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIF 381
            |||.|...   .|:   ..|.|   :...:..|.::..|...|      .||::..::.      
  Fly   531 KGKPTPQI---RWI---KDGTE---ILPTRKMFDIRTTPTDAG------GGVVAVQSIL------ 574

Human   382 TFTHNFSGPLRP----------FFEPCLHDGGKNTA-----------PLVI------CSELHKSE 419
                .|.|..||          ....||::...|:|           |:||      ..:|.:|.
  Fly   575 ----RFRGKARPNGNQLLPNDRGLYTCLYENDVNSANSSMHLRIEHEPIVIHQYNKVAYDLRESA 635

Human   420 ESI-----VPRPE 427
            |.:     .|:||
  Fly   636 EVVCRVQAYPKPE 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERMAPNP_001017922.1 Ig 43..144 CDD:325142 21/100 (21%)
SPRY_PRY_TRIM20 230..412 CDD:293985 43/233 (18%)
fredNP_608812.3 Ig 29..126 CDD:299845
IG_like 141..228 CDD:214653
Ig 147..228 CDD:299845
I-set 232..313 CDD:254352
IGc2 250..302 CDD:197706
IG_like 323..385 CDD:214653 24/102 (24%)
IGc2 330..385 CDD:197706 21/95 (22%)
Ig_2 416..501 CDD:290606 24/120 (20%)
IG_like 418..501 CDD:214653 23/118 (19%)
I-set 505..612 CDD:254352 21/131 (16%)
Ig 526..611 CDD:143165 21/109 (19%)
IG_like 633..715 CDD:214653 5/16 (31%)
Ig 635..713 CDD:143165 4/14 (29%)
FN3 720..838 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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