DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actb and Act88F

DIOPT Version :9

Sequence 1:NP_031419.1 Gene:Actb / 11461 MGIID:87904 Length:375 Species:Mus musculus
Sequence 2:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster


Alignment Length:374 Identity:359/374 - (95%)
Similarity:370/374 - (98%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
            |||..|||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     3 DDDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67

Mouse    67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 131
            |||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||:||
  Fly    68 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 132

Mouse   132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 196
            |||||||||||||||||||||:||||||:||||||||:|||||||||||||||||||||||||||
  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTER 197

Mouse   197 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 261
            |||||||||||||||||||||||||||||||||||:|:|||||||||||||||||||||||||||
  Fly   198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEAL 262

Mouse   262 FQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 326
            ||||||||||||||||.:|||||||||||||||||:|||||||||||||||||||||||||||:|
  Fly   263 FQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIK 327

Mouse   327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
            |||||||||||||||||||||||||||||||||||||||||.|||||||
  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ActbNP_031419.1 PTZ00281 1..375 CDD:173506 357/372 (96%)
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 357/372 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D283838at33208
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100127
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X104
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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