Sequence 1: | NP_000071.1 | Gene: | CHRNE / 1145 | HGNCID: | 1966 | Length: | 493 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
Alignment Length: | 514 | Identity: | 146/514 - (28%) |
---|---|---|---|
Similarity: | 253/514 - (49%) | Gaps: | 76/514 - (14%) |
- Green bases have known domain annotations that are detailed below.
Human 8 VLLLLGLLGRGVGKNEELRLYHHLFNNYDPGSRPVREPEDTVTISLKVTLTNLISLNEKEETLTT 72
Human 73 SVWIGIDWQDYRLNYSKDDFGGIETLRVPSELVWLPEIVLENNIDGQFGVAYDANVLVYEGGSVT 137
Human 138 WLPPAIYRSVCAVEVTYFPFDWQNCSLIFRSQTYNAEEVEFTFAVDNDGKTINKIDIDTEAYTEN 202
Human 203 GEWAIDFCPGVIRRHHGGATDGPGETDVIYSLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQ 267
Human 268 AGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPLLG-----RFLIFVMVVATLI--------- 318
Human 319 ---VMNC------------VIVLNVSQRTPTTHAMSPRLRHVLLELLPRLLGSPPPPEAPRAASP 368
Human 369 PRRASSVGLLL--RAEELILKKPRSELVF-------EGQRHR-QGTWT-----AAFCQ------- 411
Human 412 --SLGAAAPEVRCCVDAVNFVAESTRDQEATGEEVSDWVRMGNALDNICFWAALVLFSV 468 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CHRNE | NP_000071.1 | LIC | 21..475 | CDD:273305 | 144/501 (29%) |
Neur_chan_LBD | 24..240 | CDD:280998 | 65/215 (30%) | ||
Neur_chan_memb | 247..474 | CDD:280999 | 76/275 (28%) | ||
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 146/514 (28%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 55/189 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |