Sequence 1: | NP_033732.2 | Gene: | Chrnb2 / 11444 | MGIID: | 87891 | Length: | 501 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
Alignment Length: | 516 | Identity: | 216/516 - (41%) |
---|---|---|---|
Similarity: | 299/516 - (57%) | Gaps: | 71/516 - (13%) |
- Green bases have known domain annotations that are detailed below.
Mouse 7 SMALLFSFGLLWLCSGVLGTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVH 71
Mouse 72 EREQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSFYSNAV 136
Mouse 137 VSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVL--KSDVASLDDFTP 199
Mouse 200 SGEWDIIALPGRRNENPDDS---TYVDITYDFIIRRKPLFYTINLIIPCVLITSLAILVFYLPSD 261
Mouse 262 CGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSP 326
Mouse 327 TTHTMAPWVKVVFLEKLPTLLFLQQPRHRCARQRLRLRRRQREREGAGTLFFREGPA----ADPC 387
Mouse 388 TCFVNPASMQ---GLAGAFQAEPAAAGLGRSMGPCSC----------------GLR--------- 424
Mouse 425 -------EAVDGVRFIADHMRSEDDDQSVREDWKYVAMVIDRLFLWIFVFVCVFGTIGMFL 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chrnb2 | NP_033732.2 | LIC | 29..478 | CDD:273305 | 211/492 (43%) |
Neur_chan_LBD | 29..234 | CDD:280998 | 98/209 (47%) | ||
Neur_chan_memb | 241..477 | CDD:280999 | 107/274 (39%) | ||
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 216/514 (42%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 98/209 (47%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 106/273 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.780 |