Sequence 1: | NP_000740.1 | Gene: | CHRNB3 / 1142 | HGNCID: | 1963 | Length: | 458 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
Alignment Length: | 501 | Identity: | 197/501 - (39%) |
---|---|---|---|
Similarity: | 291/501 - (58%) | Gaps: | 68/501 - (13%) |
- Green bases have known domain annotations that are detailed below.
Human 6 MLVLIVLGIPSSATTGFNSIAENEDALLRHLFQGYQKWVRPVLHSNDTIKVYFGLKISQLVDVDE 70
Human 71 KNQLMTTNVWLKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKVIV 135
Human 136 KSNGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINEN--VDRKDFFDN 198
Human 199 GEWEILNAKGMKGNRRDGVYSYPF---ITYSFVLRRLPLFYTLFLIIPCLGLSFLTVLVFYLPSD 260
Human 261 EGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRSS 325
Human 326 STYHPMAPWVKRLFLQKLPKLLCMK---------------------DHVDRYSSP-EKEESQPVV 368
Human 369 KGK-----VLE---------KKKQKQLSDGEK----------------VLVAFLEKAADSIRYIS 403
Human 404 RHVKKEHFISQVVQDWKFVAQVLDRIFLWLFLIVSVTGSVLIFTPA 449 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CHRNB3 | NP_000740.1 | Neur_chan_LBD | 23..449 | CDD:332142 | 192/482 (40%) |
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 196/497 (39%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 95/208 (46%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 91/256 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |