DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gng3 and Ggamma30A

DIOPT Version :9

Sequence 1:NP_446110.1 Gene:Gng3 / 114117 RGDID:620805 Length:75 Species:Rattus norvegicus
Sequence 2:NP_001285776.1 Gene:Ggamma30A / 45234 FlyBaseID:FBgn0267252 Length:238 Species:Drosophila melanogaster


Alignment Length:52 Identity:17/52 - (32%)
Similarity:31/52 - (59%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat    17 RKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68
            :|.:|.:|.:||:.|..:||:.|::.::.:.:...||||.......||:.||
  Fly    15 KKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEK 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gng3NP_446110.1 GGL 13..75 CDD:128520 17/52 (33%)
Ggamma30ANP_001285776.1 GGL 11..67 CDD:238024 17/52 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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