DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadm and Mcad

DIOPT Version :9

Sequence 1:NP_031408.1 Gene:Acadm / 11364 MGIID:87867 Length:421 Species:Mus musculus
Sequence 2:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster


Alignment Length:385 Identity:283/385 - (73%)
Similarity:326/385 - (84%) Gaps:0/385 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse    36 GFSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCGGLGL 100
            |.||.|||.|.:.|..||||.||||||||.:||||||||:|:||:||||||:|.|||...|||.|
  Fly    32 GTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDL 96

Mouse   101 GTFDACLITEELAYGCTGVQTAIEANSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSA 165
            ..|..||..|||||||||:.||:||:.|||.||||:||.:||||||||:.|:|::.|||||||.|
  Fly    97 DVFTTCLSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGA 161

Mouse   166 GSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPG 230
            ||||:.|||:|||||||:|||||||||||||.|||||:|||:|||||.|.||||||||||.|:||
  Fly   162 GSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPG 226

Mouse   231 IHIGKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRA 295
            :..|:||||||||.||||||.||||||||||||||||||||||||.||:|||.|||||||||||.
  Fly   227 LTPGRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRC 291

Mouse   296 LDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAF 360
            ||||.||||:|||||..:..||.|.|:||:||:.||.:||:::.:|||:|.||||:|||||||..
  Fly   292 LDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCH 356

Mouse   361 AGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEKYK 420
            |.|:||::|:||||||||.|||:||||||||||||||||||||:|||||||:|...|..|
  Fly   357 AADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadmNP_031408.1 CaiA 39..420 CDD:224871 280/380 (74%)
MCAD 41..418 CDD:173846 278/376 (74%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P41367 278..281 1/2 (50%)
McadNP_648149.1 CaiA 35..411 CDD:224871 279/375 (74%)
MCAD 37..414 CDD:173846 278/376 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 222 1.000 Domainoid score I2575
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3
Inparanoid 1 1.050 582 1.000 Inparanoid score I1006
Isobase 1 0.950 - 0 Normalized mean entropy S2116
OMA 1 1.010 - - QHG56625
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 1 1.000 - - FOG0005377
OrthoInspector 1 1.000 - - oto94742
orthoMCL 1 0.900 - - OOG6_101120
Panther 1 1.100 - - LDO PTHR48083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3931
SonicParanoid 1 1.000 - - X3813
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.820

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