DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl1 and slpr

DIOPT Version :9

Sequence 1:NP_001106174.1 Gene:Abl1 / 11350 MGIID:87859 Length:1142 Species:Mus musculus
Sequence 2:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster


Alignment Length:1063 Identity:227/1063 - (21%)
Similarity:377/1063 - (35%) Gaps:353/1063 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    81 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNH--NGE--WCEAQTKNGQGWVPSNYITPVNSL 141
            |.:|:.||||:.|.|::.|::.:||.:.||..:.  :|:  |...:..:..|..|.:::|     
  Fly    44 DGSLWTALYDYDAQGEDELTLRRGEIVVVLSTDSEVSGDVGWWTGKIGDKVGVFPKDFVT----- 103

Mouse   142 EKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVS 206
                                            :..|.|.::|                       
  Fly   104 --------------------------------DEDPLQLNVS----------------------- 113

Mouse   207 SESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQ 271
                           |.:.|                    :.|:    |:|..::.:|..:|.|.
  Fly   114 ---------------SAIGD--------------------IQPH----EIEYNELDIKEVIGSGG 139

Mouse   272 YGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
            :.:|:.|.:  ::.::.:|.:|.::|...: :..|:||.:...:||.|:..|.|||. .....::
  Fly   140 FCKVHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCL-NTKLCLV 203

Mouse   334 TEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE 392
            .|:...|:|       ||   .::...||:..|.||:..|.||..:   :.|||||.:.|.|:.|
  Fly   204 MEYARGGSL-------NRILAGKIPPDVLVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYE 261

Mouse   393 ----NHL----VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 449
                |||    :|:.||||:|.|......:.||.   ..|..||.::.:.:|..||||::|||||
  Fly   262 AIEGNHLQQKTLKITDFGLAREMYNTQRMSAAGT---YAWMPPEVISVSTYSKFSDVWSYGVLLW 323

Mouse   450 EIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
            |:.| |.:||.|.| ||..|.:......:..|:.|||....||::|||.:|..||.|.||.:..|
  Fly   324 ELIT-GETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLE 387

Mouse   514 TMF--------QES--SISDEVEKELGKRGTRGGAGSMLQAPELPTKTRTCRRAAEQKDAPDTPE 568
            ::.        |||  .:.:...||:        ||.:....|...:.:|.......|:    .:
  Fly   388 SIACSKFTLTPQESFHYMQECWRKEI--------AGVLHDLREKEKRFQTIEEELRNKE----EQ 440

Mouse   569 LLHTKGLGESDALDSEPAVSPLLPRKERGPPDGSLNEDERLL-----------PRDRKTNLFSAL 622
            ||..:        :.:...:.||..:|:     :|.|.||:|           |..||.      
  Fly   441 LLRVQ--------NEQREKANLLKIREQ-----NLRERERVLIERELVMLQPVPSKRKH------ 486

Mouse   623 IKKKKKMAPTPPKRSSSFREMDGQPDRRGASEDDSRELCNGPPALTS--DAAEPTKSPKASNGAG 685
             ||.||..|......:.||.                       .:|:  |.||            
  Fly   487 -KKGKKNKPLQISLPTGFRH-----------------------TITAVRDKAE------------ 515

Mouse   686 VPNGAFREPGNSGFRSPHMWKKSSTLTGSRLAAAEEES-----GMSSSKRFLRSCSASCMPHGAR 745
                   :||:..|            :|.|:.|..:..     |.|:..:..||...|.:..|  
  Fly   516 -------QPGSPSF------------SGLRIVALTDGHKGKTWGPSTMHQRERSLLPSQLSGG-- 559

Mouse   746 DTEWRSVTLPRDLPSAGKQFDSSTFGGHKSEKPALPRKRTSESRSEQVAKSTAMPPPRLVKKNEE 810
            ..||.:.|              ||........|.|.:|:..::: :|||..|  |||.|      
  Fly   560 QPEWPAQT--------------STHSSFSKSAPNLDKKQQQQNQ-QQVASLT--PPPGL------ 601

Mouse   811 AAEEGFKDTESSPGSSP--PSLTPKL---------------------LRRQVTASPSSGLSHKEE 852
                |........|.:|  |.|.|.:                     :....|.:.::..::...
  Fly   602 ----GILGGSGGAGGTPATPLLYPGIPIILTRPNNNNIGNCKAITTTITTTTTTTTNNNNNNNNS 662

Mouse   853 ATKGSASGMGTPATAEPAPPSNKVGL------------------SKASSEEMRVRRHKHSSESPG 899
            .:..:.:.:...:|......:|:..|                  |..:|:......|:..|:..|
  Fly   663 ISANNNNQLNNISTINSNNNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQEYG 727

Mouse   900 RDKGRLAKLKPAPPPPPACTGKAGKPAQSPSQEAGEAGGPT------KTKCTSLAMDAVNT---D 955
            .|.    .|...|||....|        ..|.|......||      |:..:|.|..||:.   .
  Fly   728 LDH----PLAYQPPPLYLVT--------DDSSETDTVASPTGCFHFLKSGNSSAASGAVHLHRFG 780

Mouse   956 PTKAGPPGEGLRKPVPPSVPKPQSTAKPPGTPTSPVSTPSTAPAPSPLAGDQQPSSAAFIPLIST 1020
            .:....|..|.:|....|     |:..||...::..:.|:....||.   |......||...:..
  Fly   781 GSLGNSPAVGRKKHSLDS-----SSHHPPANGSNSFALPNQLTLPSE---DNNTYDHAFYRDVIK 837

Mouse  1021 RVSLRKTRQPPERI---ASGTIT 1040
            ::|:..:    ||:   :||.:|
  Fly   838 KMSMASS----ERVNSKSSGDLT 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abl1NP_001106174.1 SH3_Abl 84..137 CDD:212784 16/56 (29%)
SH2_ABL 142..235 CDD:198189 5/92 (5%)
PTKc_Abl 254..516 CDD:270645 92/279 (33%)
Pkinase_Tyr 261..512 CDD:285015 89/268 (33%)
FABD 1018..1142 CDD:197885 6/26 (23%)
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 17/93 (18%)
TyrKc 129..386 CDD:197581 89/268 (33%)
STKc_MLK 134..389 CDD:270963 89/266 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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