DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF13 and gzl

DIOPT Version :9

Sequence 1:NP_001365214.1 Gene:RNF13 / 11342 HGNCID:10057 Length:381 Species:Homo sapiens
Sequence 2:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster


Alignment Length:399 Identity:138/399 - (34%)
Similarity:213/399 - (53%) Gaps:59/399 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    14 QVYTILTVQLFAFLNLLPVEADILAYNFENAS--QTFDDLPARFGYRLPAEGLKGFLINS-KPEN 75
            |:.|:|.:.|......| |...:|.|....:.  :.|:||||:||..||:.|||.:::.: :|..
  Fly     7 QILTLLGLCLVCHEATL-VGGHVLVYRKATSQLIEEFNDLPAQFGPNLPSNGLKVYVVPARRPYY 70

Human    76 ACEPI-VPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEV 139
            .|:.: .||.:|...|..|:.|:.|.:|.|:.|:..||.|.|.|.||:|.:.|||..|.:.:|..
  Fly    71 GCDSLDRPPHLKYPPSAKFVALVARGECVFERKIRVAQNASYSAVIVYNNEGDDLEQMSAENITG 135

Human   140 LKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPLE---YYLIPFLIIVGICLILIVIF 201
            ::   |||||:|.::..:|...||.|    ::|:....||..   ..::||.|::|:|.|::||:
  Fly   136 IR---IPSVFVGHTTGKALATYFTTE----VVLIINDELPFNINTQLILPFSILIGMCFIIMVIY 193

Human   202 MITKFVQDRHRARRNRLRKDQLKKLPVHKFKK---GDEYDVCAICLDEYEDGDKLRILPCSHAYH 263
            ||.|.::::.|.||:||.|..||||||.::.|   .::||.|.|||:::.:.||||:|||||.||
  Fly   194 MIYKCIREQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYH 258

Human   264 CKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVT----EHTPLL-------RPLAS 317
            ..|:|||||:.::.||:||:||. ::|::.:........:.||    :.||||       |.:..
  Fly   259 THCIDPWLTENRRVCPICKRKVF-TKGEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQ 322

Human   318 VSAQSF--GALSES------------------RSH--QNMTESSDYEEDDN-------EDTDSSD 353
            ||:.|.  ||...|                  |.|  :|..|.|...:|:|       ....||.
  Fly   323 VSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRGHAGRNPFEESQSSDDENALLASTVRPATSSG 387

Human   354 AENEINEHD 362
            |...||..|
  Fly   388 AHERINPFD 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF13NP_001365214.1 PA_C_RZF_like 23..180 CDD:239038 54/160 (34%)
RING-H2_RNF167 238..283 CDD:319711 25/44 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..381 28/118 (24%)
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 55/164 (34%)
zf-RING_2 233..277 CDD:290367 24/43 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8867
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3672
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - otm41191
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1776
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.760

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