| Sequence 1: | NP_009210.1 | Gene: | U2AF2 / 11338 | HGNCID: | 23156 | Length: | 475 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_003748811.1 | Gene: | U2af2 / 308335 | RGDID: | 1310690 | Length: | 475 | Species: | Rattus norvegicus |
| Alignment Length: | 475 | Identity: | 474/475 - (99%) |
|---|---|---|---|
| Similarity: | 474/475 - (99%) | Gaps: | 0/475 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPL 65
Human 66 TRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGL 130
Human 131 AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDK 195
Human 196 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHK 260
Human 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQL 325
Human 326 GDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELL 390
Human 391 DDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFA 455
Human 456 NRVVVTKYCDPDSYHRRDFW 475 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| U2AF2 | NP_009210.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..90 | 88/88 (100%) | |
| Required for interaction with PRPF19. /evidence=ECO:0000269|PubMed:21536736 | 2..93 | 90/90 (100%) | |||
| Necessary and sufficient to stimulate pre-mRNAs 3'-end cleavage in a CFIm complex-dependent manner. /evidence=ECO:0000269|PubMed:17024186 | 17..47 | 29/29 (100%) | |||
| U2AF_lg | 63..474 | CDD:273727 | 409/410 (100%) | ||
| U2af2 | XP_003748811.1 | U2AF_lg | 63..474 | CDD:273727 | 409/410 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83680171 | |
| Domainoid | 1 | 1.000 | 307 | 1.000 | Domainoid score | I15142 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0120 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H110853 | |
| Inparanoid | 1 | 1.050 | 947 | 1.000 | Inparanoid score | I5908 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG51929 | |
| OrthoDB | 1 | 1.010 | - | - | D101465at9347 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003153 | |
| OrthoInspector | 1 | 1.000 | - | - | oto129439 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101356 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23139 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2550 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.270 | |||||